RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PLEKHA8Q96JA3 519 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 INTS14Q96SY0 518 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 KCNJ15Q99712 375 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 BRD7Q9NPI1 651 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 UFSP2Q9NUQ7 469 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 DNAJC27Q9NZQ0 273 aa14.88□□□□□ -0.03
COL6A1-204ENST00000486023 A0A0G2JMP0 313 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 A0A0X1KG70 313 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 ARRDC5A6NEK1 342 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 TMEM178BH3BS89 294 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 HMGN1P05114 100 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 ANXA8P13928 327 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 ADRA2CP18825 462 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 MMP16P51512 607 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 BLVRAP53004 296 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 RPS7P62081 194 aaKnown RBP14.87□□□□□ -0.03
COL6A1-204ENST00000486023 BNIP1Q12981 228 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 ZMYND11Q15326 602 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 OR8G1Q15617 311 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 GFOD2Q3B7J2 385 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 LINC01590Q5TEZ4 76 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 SPICQ8N5J4 248 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 OR4M2Q8NGB6 313 aa14.87□□□□□ -0.03
COL6A1-204ENST00000486023 DVL3Q92997 716 aaPredicted RBP14.87□□□□□ -0.03
COL6A1-204ENST00000486023 DDX28Q9NUL7 540 aaKnown RBP14.87□□□□□ -0.03
COL6A1-204ENST00000486023 CD300LBA8K4G0 201 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 ZNF878C9JN71 531 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 GLCEO94923 617 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 AVPP01185 164 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 IRF2P14316 349 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 HOXB6P17509 224 aaKnown RBP14.86□□□□□ -0.03
COL6A1-204ENST00000486023 ZFP36P26651 326 aaKnown RBP14.86□□□□□ -0.03
COL6A1-204ENST00000486023 SLC15A1P46059 708 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 CX3CR1P49238 355 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 RASSF2P50749 326 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 SEC61A1P61619 476 aaKnown RBP14.86□□□□□ -0.03
COL6A1-204ENST00000486023 KRTAP24-1Q3LI83 254 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 TEX30Q5JUR7 227 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 FAM201AQ5SY85 155 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 PRAMEF6Q5VXH4 476 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 LIPNQ5VXI9 398 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 LRRC28Q86X40 367 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-204ENST00000486023 CPOQ8IVL8 374 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 BOLLQ8N9W6 283 aaKnown RBP14.86□□□□□ -0.03
COL6A1-204ENST00000486023 C19orf18Q8NEA5 215 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 THEM6Q8WUY1 208 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 SIGLEC11Q96RL6 698 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 ABHD6Q9BV23 337 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 TEX12Q9BXU0 123 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 C7orf69Q9H7B7 122 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 G6PC2Q9NQR9 355 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 TVP23BQ9NYZ1 205 aa14.86□□□□□ -0.03
COL6A1-204ENST00000486023 LRRC30A6NM36 301 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 TCF21O43680 179 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 SELENOFO60613 162 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 H2BFMP0C1H6 154 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 NAA10P41227 235 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-204ENST00000486023 FAM57BQ71RH2 274 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-204ENST00000486023 PAPD5Q8NDF8 572 aaKnown RBP14.85□□□□□ -0.03
COL6A1-204ENST00000486023 SPATA3Q8NHX4 192 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 AMELYQ99218 206 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 NTN4Q9HB63 628 aa14.85□□□□□ -0.03
COL6A1-204ENST00000486023 PATZ1Q9HBE1 687 aaKnown RBP14.85□□□□□ -0.03
COL6A1-204ENST00000486023 FOXH1O75593 365 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 GRPP07492 148 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 THBS2P35442 1172 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 MDH2P40926 338 aaKnown RBP14.84□□□□□ -0.03
COL6A1-204ENST00000486023 PMELP40967 661 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 GRB2P62993 217 aaKnown RBP14.84□□□□□ -0.03
COL6A1-204ENST00000486023 CDK5Q00535 292 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 MAB21L1Q13394 359 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 MPPED2Q15777 294 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 SNAPC1Q16533 368 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 PCK2Q16822 640 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 TIGD6Q17RP2 521 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 C1orf146Q5VVC0 180 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 C1orf229Q6ZS94 237 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-204ENST00000486023 SHFQ7M4L6 423 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 DEFB108BQ8NET1 73 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 BBS1Q8NFJ9 593 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 OR11L1Q8NGX0 322 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 ADAT1Q9BUB4 502 aaKnown RBP14.84□□□□□ -0.03
COL6A1-204ENST00000486023 REPIN1Q9BWE0 567 aaKnown RBP14.84□□□□□ -0.03
COL6A1-204ENST00000486023 TMPRSS13Q9BYE2 586 aa14.84□□□□□ -0.03
COL6A1-204ENST00000486023 PAPOLBQ9NRJ5 636 aaKnown RBP14.84□□□□□ -0.03
COL6A1-204ENST00000486023 OTX1P32242 354 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-204ENST00000486023 DAPP51397 102 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 HCCSP53701 268 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 HOXA4Q00056 320 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-204ENST00000486023 TMEM155Q4W5P6 130 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 RFLNBQ8N5W9 214 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 OR56B2PQ8NGI1 322 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 C19orf24Q9BVV8 132 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 TMEM165Q9HC07 324 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 MMP26Q9NRE1 261 aa14.83□□□□□ -0.04
COL6A1-204ENST00000486023 DYSFO75923 2080 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 PPIAL4EA0A075B759 164 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 CEACAM18A8MTB9 384 aa14.82□□□□□ -0.04
COL6A1-204ENST00000486023 PPIAL4DF5H284 164 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms