RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ARMC1Q9NVT9 282 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 HIF1ANQ9NWT6 349 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 TREM2Q9NZC2 230 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 PDP1Q9P0J1 537 aaPredicted RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 PPP1R3CQ9UQK1 317 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 NOP16Q9Y3C1 178 aaKnown RBP5.91□□□□□ -1.46
VPS50-218ENST00000485994 U3KQV3 271 aa5.91□□□□□ -1.46
VPS50-218ENST00000485994 RIIAD1A6NNX1 92 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 F5H5K5 113 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 TMEM178BH3BS89 294 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 M0R135 149 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 FKBP6O75344 327 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 FOXH1O75593 365 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 LCATP04180 440 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 ZNF3P17036 446 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 PAICSP22234 425 aaKnown RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 PYCR1P32322 319 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 CD200P41217 278 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 SLC6A9P48067 706 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 SRP9P49458 86 aaKnown RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 GRB2P62993 217 aaKnown RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 EFNB1P98172 346 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 MVKQ03426 396 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 SCGB2A2Q13296 93 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 MAB21L1Q13394 359 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 FLOT2Q14254 428 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 HLXQ14774 488 aaPredicted RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 SPRNQ5BIV9 151 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 SLC35D3Q5M8T2 416 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 SHQ1Q6PI26 577 aaKnown RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 DEGS2Q6QHC5 323 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 PGAP1Q75T13 922 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 DCXRQ7Z4W1 244 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 TIGD4Q8IY51 512 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 MUC20Q8N307 709 aaPredicted RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 PARP8Q8N3A8 854 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 OR2Z1Q8NG97 314 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 TEX47Q8TBZ9 253 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 Q8TCH9 128 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 RNF133Q8WVZ7 376 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 UTP4Q969X6 686 aaKnown RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 SLCO4A1Q96BD0 722 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 CCDC124Q96CT7 223 aaKnown RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 SLAMF6Q96DU3 332 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 ZNF799Q96GE5 643 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 MEGF10Q96KG7 1140 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 OR2V2Q96R30 315 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 SIGLEC11Q96RL6 698 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 WDR76Q9H967 626 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 ZNF556Q9HAH1 456 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 NTN4Q9HB63 628 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 TMEM165Q9HC07 324 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 SLC25A19Q9HC21 320 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 PTTG3PQ9NZH4 202 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.9□□□□□ -1.46
VPS50-218ENST00000485994 CACNG2Q9Y698 323 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 COMMD3-BMI1R4GMX3 469 aa5.9□□□□□ -1.46
VPS50-218ENST00000485994 TVP23AA6NH52 213 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 ACOD1A6NK06 481 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 CD300LBA8K4G0 201 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 A8MXK9 166 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 ZNF878C9JN71 531 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 PRR23D1E9PI22 279 aaPredicted RBP5.89□□□□□ -1.47
VPS50-218ENST00000485994 F5H0A9 414 aaPredicted RBP5.89□□□□□ -1.47
VPS50-218ENST00000485994 H3BN98 237 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 MLNRO43193 412 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 PRODHO43272 600 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 XRCC2O43543 280 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 SOX14O95416 240 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 PNPP00491 289 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 WNT2P09544 360 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 PRR23D2P0DMB1 279 aaPredicted RBP5.89□□□□□ -1.47
VPS50-218ENST00000485994 PPIAL4GP0DN37 164 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 CLUP10909 449 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 PRKACGP22612 351 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 CFL1P23528 166 aaKnown RBP5.89□□□□□ -1.47
VPS50-218ENST00000485994 CFHR2P36980 270 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 MDH2P40926 338 aaKnown RBP5.89□□□□□ -1.47
VPS50-218ENST00000485994 ERFP50548 548 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 RAD23AP54725 363 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 ESRRGP62508 458 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 MZT1Q08AG7 82 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 CCNIQ14094 377 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 GINS1Q14691 196 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 C11orf91Q3C1V1 193 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 AVPI1Q5T686 147 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 LIPNQ5VXI9 398 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 OTPQ5XKR4 325 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 FAHD1Q6P587 224 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 USP43Q70EL4 1123 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 PRSS45Q7RTY3 260 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 DPY19L4Q7Z388 723 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 SPATA24Q86W54 205 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 C1orf87Q8N0U7 546 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 KLHL36Q8N4N3 616 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 SPICQ8N5J4 248 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 ATG16L2Q8NAA4 619 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 OR52H1Q8NGJ2 320 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 OR9Q1Q8NGQ5 310 aa5.89□□□□□ -1.47
VPS50-218ENST00000485994 OR5K1Q8NHB7 308 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms