RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 SLX4IPQ5VYV7 408 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 TMEM236Q5W0B7 351 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 ARL9Q6T311 187 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 CLEC2AQ6UVW9 174 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 Q6ZSR3 168 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 JAZF1Q86VZ6 243 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 CELF2-AS1Q8N7Q2 184 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 ZNF540Q8NDQ6 660 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 LRTOMTQ8WZ04 291 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 RDH5Q92781 318 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 UBE2FQ969M7 185 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 ITFG2Q969R8 447 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 APOBEC3DQ96AK3 386 aaPredicted RBP4.84□□□□□ -1.63
CUX1-208ENST00000485792 DIRC2Q96SL1 478 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 TEAD3Q99594 435 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 ATF6BQ99941 703 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 SLC30A2Q9BRI3 323 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 GABARAPL3Q9BY60 117 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 CHODLQ9H9P2 273 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 CYSLTR2Q9NS75 346 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 TBC1D23Q9NUY8 699 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 PLEK2Q9NYT0 353 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 USE1Q9NZ43 259 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 TAAR3PQ9P1P4 343 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 ZNF319Q9P2F9 582 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 EIF3KQ9UBQ5 218 aaKnown RBP4.84□□□□□ -1.63
CUX1-208ENST00000485792 PURGQ9UJV8 347 aaKnown RBP4.84□□□□□ -1.63
CUX1-208ENST00000485792 ZDHHC8Q9ULC8 765 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 COPS3Q9UNS2 423 aa4.84□□□□□ -1.63
CUX1-208ENST00000485792 CMYA5Q8N3K9 4069 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 G3V2T6 193 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 J3QRE1 110 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 ZNF593O00488 134 aaPredicted RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 EBAG9O00559 213 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 MLNRO43193 412 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 SRSF10O75494 262 aaKnown RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 ABHD16AO95870 558 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 IFNGP01579 166 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 LCKP06239 509 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 IGHV4-31P0DP07 118 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 NAT2P11245 290 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 ZNF3P17036 446 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 ALOX5APP20292 161 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 USF1P22415 310 aaPredicted RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 DCTDP32321 178 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 RAD23AP54725 363 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 ELF3P78545 371 aaPredicted RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 ROM1Q03395 351 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 IKZF1Q13422 519 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 GK2Q14410 553 aaPredicted RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 ZNF181Q2M3W8 571 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 SNAI3Q3KNW1 292 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 ZNF684Q5T5D7 378 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 C1orf146Q5VVC0 180 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 ZFP1Q6P2D0 407 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 DEGS2Q6QHC5 323 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 DRAM2Q6UX65 266 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 CLEC9AQ6UXN8 241 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 DPY19L4Q7Z388 723 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 DCXRQ7Z4W1 244 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 AMIGO2Q86SJ2 522 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 WDR86Q86TI4 376 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 CPOQ8IVL8 374 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 ZNF283Q8N7M2 679 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 OTOSQ8NHW6 89 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 TEX47Q8TBZ9 253 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 DVL3Q92997 716 aaPredicted RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 CMBLQ96DG6 245 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 SIGLEC11Q96RL6 698 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 MBOAT4Q96T53 435 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 KCNJ15Q99712 375 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 PKP2Q99959 881 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 VRK1Q99986 396 aaPredicted RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 ABHD6Q9BV23 337 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 BPESC1Q9GZL8 116 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 PAPOLBQ9NRJ5 636 aaKnown RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 ZNF275Q9NSD4 429 aaPredicted RBP4.83□□□□□ -1.64
CUX1-208ENST00000485792 GFOD1Q9NXC2 390 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 AASSQ9UDR5 926 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 DUSP13Q9UII6 198 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 GPR160Q9UJ42 338 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 GRIP1Q9Y3R0 1128 aa4.83□□□□□ -1.64
CUX1-208ENST00000485792 LRP5LA4QPB2 252 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ANKRD34BA5PLL1 514 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ACOD1A6NK06 481 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 RIIAD1A6NNX1 92 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 FAM157AC9JC47 383 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ZNF878C9JN71 531 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 INAFM1C9JVW0 142 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 ANKRD65E5RJM6 399 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 PRR23D1E9PI22 279 aaPredicted RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 H0YL77 283 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 M0R135 149 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 GNGT2O14610 69 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 TNFRSF13BO14836 293 aaPredicted RBP4.82□□□□□ -1.64
CUX1-208ENST00000485792 PRKYO43930 277 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 SELENOFO60613 162 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 E2F6O75461 281 aa4.82□□□□□ -1.64
CUX1-208ENST00000485792 CRLF1O75462 422 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms