RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RGS18Q9NS28 235 aa3.12□□□□□ -1.91
VPS13A-211ENST00000484581 SLC17A7Q9P2U7 560 aa3.12□□□□□ -1.91
VPS13A-211ENST00000484581 C2orf16Q68DN1 1984 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 ANKRD20A5PA0PJZ0 165 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 HAT1O14929 419 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 GATCO43716 136 aaKnown RBP3.11□□□□□ -1.91
VPS13A-211ENST00000484581 CTNSO60931 367 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 ACTL6AO96019 429 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 TCP1P17987 556 aaKnown RBP3.11□□□□□ -1.91
VPS13A-211ENST00000484581 MYL9P24844 172 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 IL12BP29460 328 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 CXCL5P42830 114 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 NMUP48645 174 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 HCAR3P49019 387 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 MAP3K7CLP57077 242 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 SYNJ2BPP57105 145 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 RPL31P62899 125 aaKnown RBP3.11□□□□□ -1.91
VPS13A-211ENST00000484581 LRRC63Q05C16 580 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 SIGLEC14Q08ET2 396 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 DGCR6Q14129 220 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 PON2Q15165 354 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 HES5Q5TA89 166 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 OR2T5Q6IEZ7 315 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 ARL9Q6T311 187 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 C6orf120Q7Z4R8 191 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 RAB43Q86YS6 212 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 LRRC8AQ8IWT6 810 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 C17orf78Q8N4C9 275 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 LINC01555Q8NAE3 123 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 OR11H7Q8NGC8 314 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 OR6K2Q8NGY2 324 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 OR2T29Q8NH02 315 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 OR51A7Q8NH64 312 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 PDCD6IPQ8WUM4 868 aaKnown RBP3.11□□□□□ -1.91
VPS13A-211ENST00000484581 TMEM239Q8WW34 195 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 RDH5Q92781 318 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 TRNT1Q96Q11 434 aaKnown RBP3.11□□□□□ -1.91
VPS13A-211ENST00000484581 TEAD3Q99594 435 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 TSNAXQ99598 290 aaKnown RBP3.11□□□□□ -1.91
VPS13A-211ENST00000484581 UTP23Q9BRU9 249 aaKnown RBP3.11□□□□□ -1.91
VPS13A-211ENST00000484581 CHRNA10Q9GZZ6 450 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 NANOGQ9H9S0 305 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 PLSCR3Q9NRY6 295 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 NRBP2Q9NSY0 501 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 RMND1Q9NWS8 449 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 VAPAQ9P0L0 249 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 POFUT2Q9Y2G5 429 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 ZNF257Q9Y2Q1 563 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 KLF12Q9Y4X4 402 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 KIF25-AS1Q9Y6Z4 181 aa3.11□□□□□ -1.91
VPS13A-211ENST00000484581 A0A1B0GW15 77 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 H7C2Y5 167 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 CD5LO43866 347 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 HLA-DPB1P04440 258 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 THRAP10827 490 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 NQO2P16083 231 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 RCC1P18754 421 aaPredicted RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 LOXP28300 417 aaPredicted RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 GNRHRP30968 328 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 MYCNOSP40205 109 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 DNASE1L1P49184 302 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 CRISP3P54108 245 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 UBE2NP61088 152 aaKnown RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 KDSRQ06136 332 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 PSG7Q13046 419 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 STX3Q13277 289 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 GINS1Q14691 196 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 ZNF239Q16600 458 aaKnown RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 PIGGQ5H8A4 983 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 SPINK14Q6IE38 97 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 FAHD1Q6P587 224 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 PLET1Q6UQ28 207 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 SPATA24Q86W54 205 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 COX18Q8N8Q8 333 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 CLHC1Q8NHS4 586 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 BLOC1S5Q8TDH9 187 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 OSBPL11Q9BXB4 747 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 SLIRPQ9GZT3 109 aaKnown RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 OR51B5Q9H339 312 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 CDC42EP4Q9H3Q1 356 aaKnown RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 SAV1Q9H4B6 383 aaPredicted RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 MYOZ1Q9NP98 299 aaPredicted RBP3.1□□□□□ -1.91
VPS13A-211ENST00000484581 NECAP2Q9NVZ3 263 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 CLEC2DQ9UHP7 191 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 HYOU1Q9Y4L1 999 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 UBIAD1Q9Y5Z9 338 aa3.1□□□□□ -1.91
VPS13A-211ENST00000484581 MTCL1Q9Y4B5 1905 aaKnown RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 IGLV3-10A0A075B6K4 115 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 TRAV8-7A0A075B6U6 113 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 IGHV3-66A0A0C4DH42 116 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 TVP23AA6NH52 213 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 RNASEK-C17orf49H0YIS7 233 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 K7EN84 100 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 LAD1O00515 517 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 SS18L1O75177 396 aaPredicted RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 TTC4O95801 387 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 FADS2O95864 444 aaKnown RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 CTSLP07711 333 aa3.09□□□□□ -1.91
VPS13A-211ENST00000484581 RBM34P42696 430 aaKnown RBP3.09□□□□□ -1.91
VPS13A-211ENST00000484581 VSNL1P62760 191 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms