RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 LCN9Q8WX39 176 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 CORO2AQ92828 525 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 FAM131CQ96AQ9 280 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 SLC25A38Q96DW6 304 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 WBP1Q96G27 269 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 CCDC3Q9BQI4 270 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 WFDC6Q9BQY6 131 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 TCEAL7Q9BRU2 100 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 ABHD14AQ9BUJ0 271 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 PDCD10Q9BUL8 212 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 ARL6Q9H0F7 186 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 MCCC2Q9HCC0 563 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 NOX4Q9NPH5 578 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 RNF186Q9NXI6 227 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 GAR1Q9NY12 217 aaKnown RBP4.24□□□□□ -1.73
SSBP1-211ENST00000484178 RASL12Q9NYN1 266 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 PRODH2Q9UF12 536 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 SHPKQ9UHJ6 478 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 PURGQ9UJV8 347 aaKnown RBP4.24□□□□□ -1.73
SSBP1-211ENST00000484178 GNG8Q9UK08 70 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 LIPGQ9Y5X9 500 aa4.24□□□□□ -1.73
SSBP1-211ENST00000484178 KIF26AQ9ULI4 1882 aaPredicted RBP4.24□□□□□ -1.73
SSBP1-211ENST00000484178 PIKFYVEQ9Y2I7 2098 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ANAPC1Q9H1A4 1944 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 SMIM30A4D0T7 59 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 RNF222A6NCQ9 220 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 FAM183AA6NL82 134 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 C2orf74A8MZ97 194 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 E9PI62 339 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ATP6V1G2-DDX39BF2Z307 99 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 SLC17A2O00624 439 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CLDN4O14493 209 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 TAAR5O14804 337 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CCL16O15467 120 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 PLRG1O43660 514 aaKnown RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 GMDSO60547 372 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 SNAPINO95295 136 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 SLC2A10O95528 541 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 PPP1R3DO95685 299 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CYB5AP00167 134 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 PNPP00491 289 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 MT-ATP6P00846 226 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CD74P04233 296 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ERCC1P07992 297 aaPredicted RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ANKRD34CP0C6C1 535 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 RNH1P13489 461 aaKnown RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ZNF250P15622 560 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 GJA1P17302 382 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 SPI1P17947 270 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CXCL2P19875 107 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 TNFRSF4P43489 277 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CX3CR1P49238 355 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 RAB38P57729 211 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CLDN2P57739 230 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 FXYD6P3P58550 94 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CTAG1AP78358 180 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 MAT1AQ00266 395 aaKnown RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 LTBQ06643 244 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 SRSF1Q07955 248 aaKnown RBP eCLIP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ZNF234Q14588 700 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 TOMM34Q15785 309 aaPredicted RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 GUCA2BQ16661 112 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 LINC00303Q3SY05 128 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ZNF776Q68DI1 518 aaPredicted RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 C18orf63Q68DL7 685 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 RTL6Q6ICC9 239 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 WBP2NLQ6ICG8 309 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 STEAP1BQ6NZ63 245 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 DRAM2Q6UX65 266 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 STAC2Q6ZMT1 411 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.23□□□□□ -1.736e-8■■■■■ 39.5
SSBP1-211ENST00000484178 ZNF704Q6ZNC4 412 aaPredicted RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 FCRLAQ7L513 359 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CHMP1BQ7LBR1 199 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ZNF546Q86UE3 836 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 OOSP2Q86WS3 158 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 MCEMP1Q8IX19 187 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 BEST3Q8N1M1 668 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 C12orf45Q8N5I9 185 aaPredicted RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 COMMD1Q8N668 190 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 NRACQ8N912 160 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 NPEPL1Q8NDH3 523 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 CCDC54Q8NEL0 328 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 BEST4Q8NFU0 473 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 OR6C4Q8NGE1 309 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 OR5M8Q8NGP6 311 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 THAP6Q8TBB0 222 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 GPX8Q8TED1 209 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ARL11Q969Q4 196 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 MCHR2Q969V1 340 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 MARC2Q969Z3 335 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ART5Q96L15 291 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 ADAD1Q96M93 576 aaKnown RBP4.23□□□□□ -1.73
SSBP1-211ENST00000484178 TMEM68Q96MH6 324 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 OR2M4Q96R27 311 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 OR2A5Q96R48 311 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 TNFRSF13CQ96RJ3 184 aa4.23□□□□□ -1.73
SSBP1-211ENST00000484178 GINS4Q9BRT9 223 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms