RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZNF343Q6P1L6 599 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 PRSS41Q7RTY9 318 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 TGIF2LXQ8IUE1 241 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 OR52R1Q8NGF1 315 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 OR5T3Q8NGG3 340 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 OR13C9Q8NGT0 318 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 THRSPQ92748 146 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 GALNT14Q96FL9 552 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-205ENST00000483122 GRHPRQ9UBQ7 328 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 GPR132Q9UNW8 380 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 HIF3AQ9Y2N7 669 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 RHBDD3Q9Y3P4 386 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 PUS1Q9Y606 427 aaKnown RBP eCLIP10.54□□□□□ -0.72
VTI1A-205ENST00000483122 TMEM14AQ9Y6G1 99 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 A0A1B0GV50 99 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 A0A1B0GWJ7 208 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 TCAPO15273 167 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF354AO60765 605 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-205ENST00000483122 SFTPBP07988 381 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 CXCL1P09341 107 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 CD37P11049 281 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF708P17019 499 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 RPL12P30050 165 aaKnown RBP10.54□□□□□ -0.72
VTI1A-205ENST00000483122 FCGR2CP31995 323 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 RAB1AP62820 205 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 PSG6Q00889 435 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 UNC119Q13432 240 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 CCINQ13939 588 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 TMEM52BQ4KMG9 183 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 PTCRAQ6ISU1 281 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-205ENST00000483122 HIST2H3AQ71DI3 136 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF679Q8IYX0 411 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 OR4K15Q8NH41 348 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 MUCL1Q96DR8 90 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 DNAJA3Q96EY1 480 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF558Q96NG5 402 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 SERINC2Q96SA4 455 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 SOX7Q9BT81 388 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 MRPS2Q9Y399 296 aaKnown RBP10.54□□□□□ -0.72
VTI1A-205ENST00000483122 HCFC2Q9Y5Z7 792 aa10.54□□□□□ -0.72
VTI1A-205ENST00000483122 LOC390937A0A1W2PQ73 354 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 SEC14L6B5MCN3 397 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 NUDT21O43809 227 aaKnown RBP10.53□□□□□ -0.72
VTI1A-205ENST00000483122 B3GALT2O43825 422 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BKO60814 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 RAMP1O60894 148 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 IFNA10P01566 189 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HLA-DQA2P01906 255 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BJP06899 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BOP23527 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 CRABP1P29762 137 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 GDI1P31150 447 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BBP33778 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 DNASE1L1P49184 302 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BDP58876 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BCP62807 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF74Q16587 644 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST2H2BEQ16778 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-205ENST00000483122 C1orf100Q5SVJ3 147 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 MED25Q71SY5 747 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 TAF8Q7Z7C8 310 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 MARCH3Q86UD3 253 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST3H2BBQ8N257 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF610Q8N9Z0 462 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 TERB2Q8NHR7 220 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 GPBAR1Q8TDU6 330 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 PMM1Q92871 262 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BHQ93079 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 BSCL2Q96G97 398 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-205ENST00000483122 S100A13Q99584 98 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 LPAR4Q99677 370 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BNQ99877 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HIST1H2BMQ99879 126 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 C8orf33Q9H7E9 229 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-205ENST00000483122 KCNJ16Q9NPI9 418 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 MBNL1Q9NR56 388 aaKnown RBP10.53□□□□□ -0.72
VTI1A-205ENST00000483122 UBQLN4Q9NRR5 601 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 CEP290O15078 2479 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 IGLON5A6NGN9 336 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 CCL16O15467 120 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 C1QL1O75973 258 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 FSTP19883 344 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 PPM1AP35813 382 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 ADPRHP54922 357 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 UCP2P55851 309 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HSD11B2P80365 405 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 RPL18Q07020 188 aaKnown RBP10.53□□□□□ -0.72
VTI1A-205ENST00000483122 C14orf28Q4W4Y0 310 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 ZNF529Q6P280 563 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 OR13C3Q8NGS6 347 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 SLC35B3Q9H1N7 401 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 DUSP15Q9H1R2 295 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-205ENST00000483122 CNTD2Q9H8S5 307 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 RAB22AQ9UL26 194 aa10.53□□□□□ -0.72
VTI1A-205ENST00000483122 HSPB2A8KAH6 182 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
VTI1A-205ENST00000483122 RPL36A-HNRNPH2H7BZ11 118 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms