RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 DPY19L4Q7Z388 723 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 TEX29Q8N6K0 151 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 ST7LQ8TDW4 575 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 MDFIQ99750 246 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 SLC22A4Q9H015 551 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 TOR3AQ9H497 397 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 OPA3Q9H6K4 179 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 SP140LQ9H930 580 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 GCM1Q9NP62 436 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 PAPOLBQ9NRJ5 636 aaKnown RBP11.72□□□□□ -0.53
VARS-225ENST00000482996 DCAF16Q9NXF7 216 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 DYSFO75923 2080 aa11.72□□□□□ -0.53
VARS-225ENST00000482996 TANC2Q9HCD6 1990 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 GGT3PA6NGU5 568 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 LRRC30A6NM36 301 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 CD300LBA8K4G0 201 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 RNF212BA8MTL3 300 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 F5H5P2 479 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 H0YL77 283 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 MLNRO43193 412 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 PRODHO43272 600 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 PLPP2O43688 288 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 IGHV2-70P01814 119 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 HSD11B1P28845 292 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 BTG1P62324 171 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 SNAI3Q3KNW1 292 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 KLHL12Q53G59 568 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 FAHD2BQ6P2I3 314 aaPredicted RBP11.71□□□□□ -0.53
VARS-225ENST00000482996 CXXC5Q7LFL8 322 aaKnown RBP11.71□□□□□ -0.53
VARS-225ENST00000482996 CPOQ8IVL8 374 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 KLHL36Q8N4N3 616 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 OR5K1Q8NHB7 308 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 ZMYND19Q96E35 227 aaPredicted RBP11.71□□□□□ -0.53
VARS-225ENST00000482996 FAHD2AQ96GK7 314 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 MARCH7Q9H992 704 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 NTN4Q9HB63 628 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 SLC25A19Q9HC21 320 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 N6AMT1Q9Y5N5 214 aa11.71□□□□□ -0.53
VARS-225ENST00000482996 A0A0G2JMP0 313 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 A0A0X1KG70 313 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 TMEM178BH3BS89 294 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
VARS-225ENST00000482996 XRCC2O43543 280 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 PNPP00491 289 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 ANXA2P07355 339 aaKnown RBP11.7□□□□□ -0.54
VARS-225ENST00000482996 SLC2A1P11166 492 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 FASP25445 335 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 MDH2P40926 338 aaKnown RBP11.7□□□□□ -0.54
VARS-225ENST00000482996 CX3CR1P49238 355 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 MMP16P51512 607 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 CRISP1P54107 249 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 PRSS12P56730 875 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 RPS7P62081 194 aaKnown RBP11.7□□□□□ -0.54
VARS-225ENST00000482996 ZNF92Q03936 586 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 SCGB2A2Q13296 93 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 OR8G1Q15617 311 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 ATP6AP1Q15904 470 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 SNAPC1Q16533 368 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 SLC35D3Q5M8T2 416 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 GLYATL3Q5SZD4 288 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 ZFP1Q6P2D0 407 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 FAHD1Q6P587 224 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 MOGAT3Q86VF5 341 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 LRRC28Q86X40 367 aaPredicted RBP11.7□□□□□ -0.54
VARS-225ENST00000482996 TIGD4Q8IY51 512 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 C1orf87Q8N0U7 546 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 MUC20Q8N307 709 aaPredicted RBP11.7□□□□□ -0.54
VARS-225ENST00000482996 PARP8Q8N3A8 854 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 CELF2-AS1Q8N7Q2 184 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 OR4M2Q8NGB6 313 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 OR2AE1Q8NHA4 323 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 RNF133Q8WVZ7 376 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 ABHD6Q9BV23 337 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
VARS-225ENST00000482996 PRRG3Q9BZD7 231 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
VARS-225ENST00000482996 J3QLI3 93 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 TBX1O43435 398 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 FOXH1O75593 365 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 HLA-DPB1P04440 258 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 FCGR1AP12314 374 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 IRF2P14316 349 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 GATA3P23771 443 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 ESRRGP62508 458 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 ZMYND11Q15326 602 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 TIGD6Q17RP2 521 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 ZNF181Q2M3W8 571 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 DCAF12L2Q5VW00 463 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 TMEM236Q5W0B7 351 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 RHOUQ7L0Q8 258 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.69□□□□□ -0.54
VARS-225ENST00000482996 OR11L1Q8NGX0 322 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 ZNF420Q8TAQ5 688 aaPredicted RBP11.69□□□□□ -0.54
VARS-225ENST00000482996 ERGIC1Q969X5 290 aa11.69□□□□□ -0.54
VARS-225ENST00000482996 SIGLEC11Q96RL6 698 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms