RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 USF2Q15853 346 aaPredicted RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 UBE2UQ5VVX9 321 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 SAXO2Q658L1 398 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 THOC7Q6I9Y2 204 aaKnown RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 TWF2Q6IBS0 349 aaKnown RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 NEGR1Q7Z3B1 354 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 VTCN1Q7Z7D3 282 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 CDKL3Q8IVW4 592 aaPredicted RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 BPIFCQ8NFQ6 507 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 OR4K5Q8NGD3 323 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 OR10AD1Q8NGE0 317 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 MITD1Q8WV92 249 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 TSEN15Q8WW01 171 aaKnown RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 ASZ1Q8WWH4 475 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 TMIGD2Q96BF3 282 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 FLYWCH2Q96CP2 140 aaKnown RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 SNF8Q96H20 258 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 ZBED3Q96IU2 234 aaPredicted RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 RNF157Q96PX1 679 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 RNF5Q99942 180 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 TDRD3Q9H7E2 651 aaKnown RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 CCDC59Q9P031 241 aaKnown RBP2.64□□□□□ -1.99
PTPN12-211ENST00000481154 HMGXB4Q9UGU5 601 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 TRIOBPQ9H2D6 2365 aa2.64□□□□□ -1.99
PTPN12-211ENST00000481154 SBNO1A3KN83 1393 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 COL1A2P08123 1366 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 IGHV1OR15-9A0A0B4J2B8 117 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 OR2AG2A6NM03 316 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 SMKR1H3BMG3 65 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 DNALI1O14645 258 aaPredicted RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 RDH16O75452 317 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 CTAG2O75638 210 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 ZNF189O75820 626 aaPredicted RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 MYO1DO94832 1006 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 H6PDO95479 791 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 EIF4EP06730 217 aaKnown RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 SERPINE2P07093 398 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 ZNF14P17017 642 aaPredicted RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 HOXA6P31267 233 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 OPRK1P41145 380 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 SLC11A1P49279 550 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 PPP1CBP62140 327 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 SP4Q02446 784 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 LIPEQ05469 1076 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 SELENBP1Q13228 472 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 ITGB3BPQ13352 177 aaPredicted RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 DMC1Q14565 340 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 PRSS8Q16651 343 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 NKAIN1Q4KMZ8 207 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 SPANXN2Q5MJ10 180 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 AVPI1Q5T686 147 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 GPR107Q5VW38 600 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 CSGALNACT2Q8N6G5 542 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 NECAP1Q8NC96 275 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 ANGPTL6Q8NI99 470 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 LRRC29Q8WV35 223 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 CAPSLQ8WWF8 208 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 TMEM230Q96A57 120 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 MCUR1Q96AQ8 359 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 EEF1AKMT3Q96AZ1 226 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 OPTNQ96CV9 577 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 DOK1Q99704 481 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 FRMD8P1Q9BZ68 369 aaPredicted RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 OR52D1Q9H346 318 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 CYP3A43Q9HB55 503 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 DDX19BQ9UMR2 479 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 HYOU1Q9Y4L1 999 aa2.63□□□□□ -1.99
PTPN12-211ENST00000481154 TSSC4Q9Y5U2 329 aaPredicted RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 BZW2Q9Y6E2 419 aaKnown RBP2.63□□□□□ -1.99
PTPN12-211ENST00000481154 TRBV9A0A0B4J1U6 114 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 TMEM210A6NLX4 147 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 SUPT3HB4E1H0 165 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 SCAMP2O15127 329 aaKnown RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 EIF3HO15372 352 aaKnown RBP eCLIP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 SOCS1O15524 211 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 EIF4E2O60573 245 aaKnown RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CLDN11O75508 207 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CBR3O75828 277 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CDK14O94921 469 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CCNE2O96020 404 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 HLA-DRAP01903 254 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 HLA-DQA1P01909 254 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 ARG1P05089 322 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CT45A6P0DMU7 189 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CT45A5P0DMU8 189 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CT45A7P0DMV0 189 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 PTNP21246 168 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 OTX1P32242 354 aaPredicted RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 HSPA13P48723 471 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 GDI2P50395 445 aaKnown RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 YWHAEP62258 255 aaKnown RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 PRR3P79522 188 aaKnown RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 KDSRQ06136 332 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 TGM3Q08188 693 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 ZNF816Q0VGE8 651 aaPredicted RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CDC20Q12834 499 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 XRCC4Q13426 336 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 HNRNPA1L2Q32P51 320 aaKnown RBP2.62□□□□□ -1.99
PTPN12-211ENST00000481154 CHRFAM7AQ494W8 412 aa2.62□□□□□ -1.99
PTPN12-211ENST00000481154 KRTAP13-2Q52LG2 175 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms