RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	TMEM100	Q9NV29	134 aa		10.85	□□□□□ -0.67
ABCF3-215	ENST00000481116	DNAJC27	Q9NZQ0	273 aa		10.85	□□□□□ -0.67
ABCF3-215	ENST00000481116		M0R129	80 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	TBX1	O43435	398 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	HMGN1	P05114	100 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	CA6	P23280	308 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	SRP14	P37108	136 aa	Known RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	PMEL	P40967	661 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	NAA10	P41227	235 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	CX3CR1	P49238	355 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	MMP16	P51512	607 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	BLVRA	P53004	296 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	HCCS	P53701	268 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	CRISP1	P54107	249 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	HOXA4	Q00056	320 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	ZMYND11	Q15326	602 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	ATP6AP1	Q15904	470 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	FAM201A	Q5SY85	155 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	FAHD1	Q6P587	224 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	DRAM2	Q6UX65	266 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	CXXC5	Q7LFL8	322 aa	Known RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	PEG10	Q86TG7	708 aa	Known RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	MOGAT3	Q86VF5	341 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	LRTOMT	Q8WZ04	291 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	RAB39B	Q96DA2	213 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	NRBF2	Q96F24	287 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	FAHD2A	Q96GK7	314 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	PLEKHA8	Q96JA3	519 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	REPIN1	Q9BWE0	567 aa	Known RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	SLC25A19	Q9HC21	320 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	BRD7	Q9NPI1	651 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	TVP23B	Q9NYZ1	205 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	KLHDC2	Q9Y2U9	406 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	AP4S1	Q9Y587	144 aa		10.84	□□□□□ -0.67
ABCF3-215	ENST00000481116	GGT3P	A6NGU5	568 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	CD300LB	A8K4G0	201 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	TMEM178B	H3BS89	294 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	PHF1	O43189	567 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	AVP	P01185	164 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	ANXA2	P07355	339 aa	Known RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	SLC2A5	P22732	501 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	HSD11B1	P28845	292 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	EPHA2	P29317	976 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	SRP9	P49458	86 aa	Known RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	SEC61A1	P61619	476 aa	Known RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	RPS7	P62081	194 aa	Known RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	LCN2	P80188	198 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	MAB21L1	Q13394	359 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	APOF	Q13790	326 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	PTGES3	Q15185	160 aa	Known RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	SNAPC1	Q16533	368 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	PRAMEF6	Q5VXH4	476 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	SHF	Q7M4L6	423 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	THEM6	Q8WUY1	208 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	RNF133	Q8WVZ7	376 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	SEMA6A	Q9H2E6	1030 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	G6PC2	Q9NQR9	355 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZNF319	Q9P2F9	582 aa		10.83	□□□□□ -0.68
ABCF3-215	ENST00000481116	TRAV20	A0A0B4J274	112 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116		A0A1B0GWJ7	208 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116		G3V2T6	193 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	PRODH	O43272	600 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	PRKY	O43930	277 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	MRPL3	P09001	348 aa	Known RBP	10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	ANPEP	P15144	967 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	FAS	P25445	335 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZFP36	P26651	326 aa	Known RBP	10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZNF121	P58317	390 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	BTG1	P62324	171 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	GRB2	P62993	217 aa	Known RBP	10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	OR8G1	Q15617	311 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	MPPED2	Q15777	294 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	FAM57B	Q71RH2	274 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	ASRGL1	Q7L266	308 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	LRRC28	Q86X40	367 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	C19orf18	Q8NEA5	215 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	OTOS	Q8NHW6	89 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	DUS3L	Q96G46	650 aa	Known RBP	10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	KRT84	Q9NSB2	600 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	UFSP2	Q9NUQ7	469 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	PCDHB10	Q9UN67	800 aa		10.82	□□□□□ -0.68
ABCF3-215	ENST00000481116	LOC105371242	A0A075B767	164 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	CCDC182	A6NF36	153 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	RNF212B	A8MTL3	300 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	CIB2	O75838	187 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	PNP	P00491	289 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	LYN	P07948	512 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	H2BFM	P0C1H6	154 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	OPRL1	P41146	370 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	SLC15A1	P46059	708 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	GFOD2	Q3B7J2	385 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	LRRN1	Q6UXK5	716 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	PRSS45	Q7RTY3	260 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	OR56B2P	Q8NGI1	322 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms