RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 PMF1-BGLAPU3KQ54 211 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 IGLV3-9A0A075B6K5 115 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 C5orf63A6NC05 138 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 CCDC182A6NF36 153 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 LYNX1G3V0Z9 82 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 ICMTO60725 284 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 NOL3O60936 208 aaKnown RBP10.46□□□□□ -0.73
PTPRF-213ENST00000481019 F12P00748 615 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-213ENST00000481019 IGHA1P01876 353 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 LYNX1P0DP58 116 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 COX5BP10606 129 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 NAT2P11245 290 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 ALDH3B2P48448 385 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 GALEQ14376 348 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 IRF3Q14653 427 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 NEDD8Q15843 81 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 SYT6Q5T7P8 510 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-213ENST00000481019 PLEKHG7Q6ZR37 379 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 ALDH16A1Q8IZ83 802 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 NANOGP1Q8N7R0 232 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 OR10H4Q8NGA5 316 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 OR52N1Q8NH53 320 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 ABHD4Q8TB40 342 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 ZMYND19Q96E35 227 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-213ENST00000481019 C18orf12Q96KH6 178 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 INTS14Q96SY0 518 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 WACQ9BTA9 647 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 CDADC1Q9BWV3 514 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 OR2J1Q9GZK6 312 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 MARCH7Q9H992 704 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 PAK1IP1Q9NWT1 392 aaPredicted RBP10.46□□□□□ -0.73
PTPRF-213ENST00000481019 TAAR3PQ9P1P4 343 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 POLR1DQ9Y2S0 133 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 STARD10Q9Y365 291 aa10.46□□□□□ -0.73
PTPRF-213ENST00000481019 CSPG4Q6UVK1 2322 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 NCR1O76036 304 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 MT-ND5P03915 603 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 INHBBP09529 407 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 PCMT1P22061 227 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 RBMXP38159 391 aaKnown RBP10.45□□□□□ -0.74
PTPRF-213ENST00000481019 RAD52P43351 418 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 EVX1P49640 407 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 WNT4P56705 351 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 TAS2R43P59537 309 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 PPP1CBP62140 327 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 RPS23P62266 143 aaKnown RBP10.45□□□□□ -0.74
PTPRF-213ENST00000481019 BDH1Q02338 343 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 KRTAP1-1Q07627 177 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 SPHARQ15513 63 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 MED22Q15528 200 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 TIMM50Q3ZCQ8 353 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 TEX30Q5JUR7 227 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 ELFN2Q5R3F8 820 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 KCTD18Q6PI47 426 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-213ENST00000481019 Q71RC1 249 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-213ENST00000481019 NAA40Q86UY6 237 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 SLC35F2Q8IXU6 374 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 SYS1Q8N2H4 156 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 SYNPRQ8TBG9 265 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 KLF14Q8TD94 323 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-213ENST00000481019 SNX33Q8WV41 574 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 MUL1Q969V5 352 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 COG8Q96MW5 612 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 BCL2L14Q9BZR8 327 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 BARX1Q9HBU1 254 aaPredicted RBP10.45□□□□□ -0.74
PTPRF-213ENST00000481019 ADGRL4Q9HBW9 690 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 DYNLRB1Q9NP97 96 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 LAMP5Q9UJQ1 280 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 GRIP1Q9Y3R0 1128 aa10.45□□□□□ -0.74
PTPRF-213ENST00000481019 A0A1W2PPW3 197 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 J3QRE1 110 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 M0R233 179 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 LY6G6DO95868 133 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 ABHD16AO95870 558 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 HPXP02790 462 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 HTR1AP08908 422 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 PSMB9P28065 219 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 MAGEB1P43366 347 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 ENTPD1P49961 510 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 PRSS12P56730 875 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 KLF3P57682 345 aaPredicted RBP10.44□□□□□ -0.74
PTPRF-213ENST00000481019 EGR3Q06889 387 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 GPR50Q13585 617 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 PCK2Q16822 640 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 TIGD6Q17RP2 521 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 SPRNQ5BIV9 151 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 RHOUQ7L0Q8 258 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 ERI1Q8IV48 349 aaKnown RBP10.44□□□□□ -0.74
PTPRF-213ENST00000481019 GJC3Q8NFK1 279 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 ZNF420Q8TAQ5 688 aaPredicted RBP10.44□□□□□ -0.74
PTPRF-213ENST00000481019 C10orf105Q8TEF2 133 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 DGCR14Q96DF8 476 aaKnown RBP10.44□□□□□ -0.74
PTPRF-213ENST00000481019 AMELYQ99218 206 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 COQ7Q99807 217 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 BCL7BQ9BQE9 202 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 REG4Q9BYZ8 158 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 ERVK13-1Q9NX77 482 aa10.44□□□□□ -0.74
PTPRF-213ENST00000481019 EIF3KQ9UBQ5 218 aaKnown RBP10.44□□□□□ -0.74
PTPRF-213ENST00000481019 SVEP1Q4LDE5 3571 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms