RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ANKRD16Q6P6B7 361 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 UTS2BQ765I0 119 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 CCDC36Q8IYA8 594 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 CMTM4Q8IZR5 234 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 C19orf18Q8NEA5 215 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 OR4M2Q8NGB6 313 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 NANOS1Q8WY41 292 aaKnown RBP9.63□□□□□ -0.87
VTI1A-204ENST00000480057 PP6455Q8WZ26 134 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 SLC25A28Q96A46 364 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 FGGYQ96C11 551 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 PPP1R14BQ96C90 147 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 SLC25A38Q96DW6 304 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 ADAT3Q96EY9 351 aaPredicted RBP9.63□□□□□ -0.87
VTI1A-204ENST00000480057 SORCS2Q96PQ0 1159 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 METTL17Q9H7H0 456 aaPredicted RBP9.63□□□□□ -0.87
VTI1A-204ENST00000480057 C14orf119Q9NWQ9 140 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 ZNF319Q9P2F9 582 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 TBC1D24Q9ULP9 559 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 CLEC4AQ9UMR7 237 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 ZNF407Q9C0G0 2248 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 A0A0B4J203 849 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 DLL1O00548 723 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 PDGFAP04085 211 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 CRHP06850 196 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 ITGA5P08648 1049 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 SLC2A1P11166 492 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 GABRA1P14867 456 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 RAB6AP20340 208 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 FAPQ12884 760 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 ACSF3Q4G176 576 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-204ENST00000480057 NSUN5P2Q63ZY6 315 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 COLCA1Q6ZS62 124 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 FAM214BQ7L5A3 538 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 COMMD2Q86X83 199 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 UBE2J2Q8N2K1 259 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 DNAAF1Q8NEP3 725 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 OR1K1Q8NGR3 316 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 OR6K3Q8NGY3 331 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 SYNPRQ8TBG9 265 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 SNRNP27Q8WVK2 155 aaKnown RBP9.62□□□□□ -0.87
VTI1A-204ENST00000480057 RFT1Q96AA3 541 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 FAM3DQ96BQ1 224 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 GPR137Q96N19 417 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 TRIB1Q96RU8 372 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 C1QTNF5Q9BXJ0 243 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 SLC22A4Q9H015 551 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 RNF121Q9H920 327 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 PLEKHA1Q9HB21 404 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 NEK6Q9HC98 313 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 RHBDL2Q9NX52 303 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 ZNF224Q9NZL3 707 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 FBLN5Q9UBX5 448 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
VTI1A-204ENST00000480057 CUL9Q8IWT3 2517 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 MBD3L4A6NDZ8 208 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 MBD3L3A6NE82 208 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 MBD3L5A6NJ08 208 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 H3BSH0 61 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 LDLRAD4O15165 306 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 XRCC2O43543 280 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 WDR1O75083 606 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 IGHV3-9P01782 118 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 HOXD4P09016 255 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 PRF1P14222 555 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 POU3F4P49335 361 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 INPP1P49441 399 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 TMPRSS3P57727 454 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 TGFBR3Q03167 851 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 FAM189A2Q15884 450 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 TBR1Q16650 682 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 C2orf76Q3KRA6 126 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 PABPC1L2AQ5JQF8 200 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 GLYATL3Q5SZD4 288 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 ZBTB37Q5TC79 503 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 MZT2BQ6NZ67 158 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 TFAP2EQ6VUC0 442 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 GDPD3Q7L5L3 318 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 C1orf162Q8NEQ5 155 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 OR51A2Q8NGJ7 313 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 AKR7LQ8NHP1 331 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 MBD3L2Q8NHZ7 208 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 FGFBP3Q8TAT2 258 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 SMIM4Q8WVI0 70 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 AKAP1Q92667 903 aaKnown RBP eCLIP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 BCL2L2Q92843 193 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 TRIM63Q969Q1 353 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 SGK3Q96BR1 496 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 ZC3HAV1LQ96H79 300 aaKnown RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 FAM71F1Q96KD3 344 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 LYZL4Q96KX0 146 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 ABHD1Q96SE0 405 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 THAP7Q9BT49 309 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-204ENST00000480057 CHST5Q9GZS9 411 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 PRSS50Q9UI38 385 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 RHBDD3Q9Y3P4 386 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 DNAJC13O75165 2243 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
VTI1A-204ENST00000480057 GABARAPH6UMI1 98 aa9.6□□□□□ -0.87
VTI1A-204ENST00000480057 J3QW42 95 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms