RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ZNF485Q8NCK3 441 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 OR51L1Q8NGJ5 315 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 UBE2FQ969M7 185 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 RNFT2Q96EX2 444 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 MARS2Q96GW9 593 aaKnown RBP7.64□□□□□ -1.19
DDX56-211ENST00000479602 MS4A3Q96HJ5 214 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 C4orf45Q96LM5 186 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 PLK3Q9H4B4 646 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 RNF121Q9H920 327 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 CDH20Q9HBT6 801 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 NKIRAS2Q9NYR9 191 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 CAB39Q9Y376 341 aaPredicted RBP7.64□□□□□ -1.19
DDX56-211ENST00000479602 EXOSC1Q9Y3B2 195 aaKnown RBP7.64□□□□□ -1.19
DDX56-211ENST00000479602 PCDHGB5Q9Y5G0 923 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 ARFGEF3Q5TH69 2177 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 MALRD1Q5VYJ5 2156 aa7.64□□□□□ -1.19
DDX56-211ENST00000479602 IGHV4-30-2A0A087WSY4 118 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 B9A039 149 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 ATP6V1G2-DDX39BF2Z307 99 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 M0R1B8 84 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 FAM20BO75063 409 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 CLIC3O95833 236 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 GPANK1O95872 356 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 ISG15P05161 165 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 CELA3BP08861 270 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 LIMS3P0CW19 117 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 LIMS4P0CW20 117 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 CRHBPP24387 322 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 APEX1P27695 318 aaKnown RBP7.63□□□□□ -1.19
DDX56-211ENST00000479602 DDOSTP39656 456 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 PPOXP50336 477 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 RIDAP52758 137 aaKnown RBP7.63□□□□□ -1.19
DDX56-211ENST00000479602 GALK2Q01415 458 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 ZNF85Q03923 595 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 IRF3Q14653 427 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 OR8B8Q15620 311 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 ADIPOQQ15848 244 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 SWI5Q1ZZU3 235 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 ZMAT1Q5H9K5 638 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 C6orf52Q5T4I8 152 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 B3GLCTQ6Y288 498 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 PRSS48Q7RTY5 328 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 KLBQ86Z14 1044 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 LINC00346Q8IVM7 164 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 PHC2Q8IXK0 858 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 ZNF101Q8IZC7 436 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 PLPP7Q8NBV4 271 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 OR51G2Q8NGK0 314 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 OR52I1Q8NGK6 324 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 AKR7LQ8NHP1 331 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 MRPL24Q96A35 216 aaKnown RBP7.63□□□□□ -1.19
DDX56-211ENST00000479602 C10orf35Q96D05 121 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 SLC22A4Q9H015 551 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 BARX1Q9HBU1 254 aaPredicted RBP7.63□□□□□ -1.19
DDX56-211ENST00000479602 ABCB9Q9NP78 766 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 CYSLTR2Q9NS75 346 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 FAM206AQ9NX38 181 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 SCN3BQ9NY72 215 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 SLCO1C1Q9NYB5 712 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 EIF3KQ9UBQ5 218 aaKnown RBP7.63□□□□□ -1.19
DDX56-211ENST00000479602 COPS3Q9UNS2 423 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 LRCH1Q9Y2L9 728 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 NOP16Q9Y3C1 178 aaKnown RBP7.63□□□□□ -1.19
DDX56-211ENST00000479602 LRP12Q9Y561 859 aa7.63□□□□□ -1.19
DDX56-211ENST00000479602 TENM1Q9UKZ4 2725 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 A0A1W2PQL4 384 aaPredicted RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 A0A1W2PR80 420 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 C5orf49A4QMS7 147 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 METTL15A6NJ78 407 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 IQCF6A8MYZ5 107 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 VWC2LB2RUY7 222 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 FSTL3O95633 263 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 PTBP3O95758 552 aaKnown RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 KRT8P05787 483 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 CDK1P06493 297 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 TACSTD2P09758 323 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 PATE4P0C8F1 98 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 BMP4P12644 408 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 SELEP16581 610 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 NAA10P41227 235 aaPredicted RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 DSCR9P59020 149 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 TUBA1BP68363 451 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 TUBA4AP68366 448 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 MRPS11P82912 194 aaKnown RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 MVKQ03426 396 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 PIGFQ07326 219 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 SNTB2Q13425 540 aaKnown RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 GPR50Q13585 617 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 TBCEQ15813 527 aaPredicted RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 KCTD21Q4G0X4 260 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 AGAP6Q5VW22 663 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 KRT80Q6KB66 452 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 CORO6Q6QEF8 472 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 SLC22A25Q6T423 547 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 RFPL4BQ6ZWI9 263 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 TUBA1AQ71U36 451 aa7.62□□□□□ -1.19
DDX56-211ENST00000479602 BCDIN3DQ7Z5W3 292 aaKnown RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 PAQR4Q8N4S7 273 aaPredicted RBP7.62□□□□□ -1.19
DDX56-211ENST00000479602 CNIH3Q8TBE1 160 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms