RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 B3GAT1Q9P2W7 334 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 WARS2Q9UGM6 360 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 OAZ3Q9UMX2 235 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 SIGLEC7Q9Y286 467 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 TPRKBQ9Y3C4 175 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 CDH10Q9Y6N8 788 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 CIB4A0PJX0 185 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 MEIOCA2RUB1 952 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 NKX2-6A6NCS4 301 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 A8MXE2 369 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 TRAF3IP2O43734 574 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 CDC14BO60729 498 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 SOX14O95416 240 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 RENP00797 406 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 GNAO1P09471 354 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 HLA-DOBP13765 273 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 APEHP13798 732 aaKnown RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 PRKACGP22612 351 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 IGFBP5P24593 272 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 POU1F1P28069 291 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ACVR1BP36896 505 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 CD79BP40259 229 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 SELENOPP49908 381 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF84P51523 738 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ERVK-25P63136 954 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 SORDQ00796 357 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 CD47Q08722 323 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 MAB21L1Q13394 359 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 CAMK2DQ13557 499 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 P2RY6Q15077 328 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ACKR1Q16570 336 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 BAK1Q16611 211 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 TIMM50Q3ZCQ8 353 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 FBXL19-AS1Q494R0 122 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 LBHQ53QV2 105 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 FAM209BQ5JX69 171 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 C6orf141Q5SZD1 244 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 CARD17Q5XLA6 110 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF770Q6IQ21 691 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 SLC27A4Q6P1M0 643 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF529Q6P280 563 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 DNM1P34Q6PK57 102 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 KLHL17Q6TDP4 642 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 KLHL24Q6TFL4 600 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 PGAP1Q75T13 922 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 UTS2BQ765I0 119 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 SSX8Q7RTT4 187 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 TMEM179BQ7Z7N9 219 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 RELL2Q8NC24 303 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 NOXO1Q8NFA2 376 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 STEAP2Q8NFT2 490 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 OR2T33Q8NG76 320 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 OR4D10Q8NGI6 311 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 MAGEE2Q8TD90 523 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 DEDD2Q8WXF8 326 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ASB10Q8WXI3 467 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 SAMD8Q96LT4 415 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ERMAPQ96PL5 475 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 RBP7Q96R05 134 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 OR2M2Q96R28 347 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 GPX7Q96SL4 187 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 NIPSNAP1Q9BPW8 284 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ALG12Q9BV10 488 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 EMC6Q9BV81 110 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 TSSK6Q9BXA6 273 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ULBP2Q9BZM5 246 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 RACGAP1Q9H0H5 632 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 OR10A4Q9H209 315 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 DUSP21Q9H596 190 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 RANBP3Q9H6Z4 567 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 EGLN3Q9H6Z9 239 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ABCB10Q9NRK6 738 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 TAS2R16Q9NYV7 291 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 JKAMPQ9P055 326 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 NDRG3Q9UGV2 375 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ING1Q9UK53 422 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF346Q9UL40 294 aaKnown RBP5.42□□□□□ -1.54
SF3B1-209ENST00000479532 GPR52Q9Y2T5 361 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 IER3IP1Q9Y5U9 82 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 POLEQ07864 2286 aa5.42□□□□□ -1.54
SF3B1-209ENST00000479532 KALRNO60229 2985 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 SMG1Q96Q15 3661 aaKnown RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 INTS1Q8N201 2190 aaKnown RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 TEX13CA0A0J9YWL9 993 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 A0A1B0GWJ7 208 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 WIPF3A6NGB9 483 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 RIIAD1A6NNX1 92 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 C16orf97H3BN30 126 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 I3L521 148 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ARPC3O15145 178 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 HOXA3O43365 443 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CLN5O75503 358 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF432O94892 652 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 FARS2O95363 451 aaKnown RBP5.41□□□□□ -1.54
SF3B1-209ENST00000479532 PPP1R3DO95685 299 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CGAP01215 116 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 IGHV3-9P01782 118 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 HLA-DQB1P01920 261 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 CDK1P06493 297 aa5.41□□□□□ -1.54
SF3B1-209ENST00000479532 PGA4P0DJD7 388 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms