RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 AMELYQ99218 206 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 CNN2Q99439 309 aaKnown RBP13.15□□□□□ -0.3
C9orf3-217ENST00000479161 SLC29A1Q99808 456 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 SAP30LQ9HAJ7 183 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 PTTG3PQ9NZH4 202 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 DYSFO75923 2080 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 IGHV1-69-2A0A0G2JMI3 117 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 SBK2P0C263 348 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 COL8A2P25067 703 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 PRKXP51817 358 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 SLC3A1Q07837 685 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 HLXQ14774 488 aaPredicted RBP13.14□□□□□ -0.31
C9orf3-217ENST00000479161 SNCBQ16143 134 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 SNAI3Q3KNW1 292 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 CLEC9AQ6UXN8 241 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 Q6ZR03 302 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 KRT74Q7RTS7 529 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF679Q8IYX0 411 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF283Q8N7M2 679 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 THEM6Q8WUY1 208 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 MROQ9BYG7 248 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 BPESC1Q9GZL8 116 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 ADGRL4Q9HBW9 690 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 CLN6Q9NWW5 311 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 IMPAD1Q9NX62 359 aa13.14□□□□□ -0.31
C9orf3-217ENST00000479161 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.14□□□□□ -0.31
C9orf3-217ENST00000479161 SNTNA6NMZ2 147 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 SPRY3O43610 288 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 FSTL3O95633 263 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 BAG2O95816 211 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 LY6G6DO95868 133 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 OR2T7P0C7T2 308 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 ANPEPP15144 967 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
C9orf3-217ENST00000479161 CX3CR1P49238 355 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 MMP16P51512 607 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 PSMA6P60900 246 aaKnown RBP13.13□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF92Q03936 586 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 EGR3Q06889 387 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 HFEQ30201 348 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 OR2T2Q6IF00 324 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
C9orf3-217ENST00000479161 PLPP7Q8NBV4 271 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 OR2T27Q8NH04 317 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 YIPF5Q969M3 257 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 ERGIC1Q969X5 290 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 C1orf159Q96HA4 380 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 OR8B4Q96RC9 309 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 OR10A2Q9H208 303 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 DCLRE1BQ9H816 532 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 MSL2Q9HCI7 577 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 TMEM100Q9NV29 134 aa13.13□□□□□ -0.31
C9orf3-217ENST00000479161 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
C9orf3-217ENST00000479161 CD300LBA8K4G0 201 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 CASQ2O14958 399 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-217ENST00000479161 GMDSO60547 372 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 LILRA1O75019 489 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 PTBP3O95758 552 aaKnown RBP13.12□□□□□ -0.31
C9orf3-217ENST00000479161 GATA4P43694 442 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 GZMKP49863 264 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 CHN2P52757 468 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-217ENST00000479161 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-217ENST00000479161 KRTAP1-1Q07627 177 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF181Q2M3W8 571 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 TMEM249Q2WGJ8 235 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 GLYATL3Q5SZD4 288 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 USP51Q70EK9 711 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 KRT77Q7Z794 578 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 RHOXF1Q8NHV9 184 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 FAM81AQ8TBF8 368 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 GTF3AQ92664 365 aaKnown RBP13.12□□□□□ -0.31
C9orf3-217ENST00000479161 MBOAT4Q96T53 435 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 ZNF275Q9NSD4 429 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-217ENST00000479161 FAM118AQ9NWS6 357 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 SMPD3Q9NY59 655 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-217ENST00000479161 KLHDC2Q9Y2U9 406 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 LRP12Q9Y561 859 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 MALRD1Q5VYJ5 2156 aa13.12□□□□□ -0.31
C9orf3-217ENST00000479161 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
C9orf3-217ENST00000479161 A0A0U1RQV5 110 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 LOC100130705A0A1B0GUX0 176 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 M0R129 80 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 SMAD7O15105 426 aaKnown RBP13.11□□□□□ -0.31
C9orf3-217ENST00000479161 CD5LO43866 347 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 ATP6V1B1P15313 513 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 GABRB1P18505 474 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 CPT2P23786 658 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-217ENST00000479161 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
C9orf3-217ENST00000479161 TSTQ16762 297 aaKnown RBP13.11□□□□□ -0.31
C9orf3-217ENST00000479161 BCDIN3DQ7Z5W3 292 aaKnown RBP13.11□□□□□ -0.31
C9orf3-217ENST00000479161 SLC35F2Q8IXU6 374 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 SPRYD4Q8WW59 207 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-217ENST00000479161 SGK3Q96BR1 496 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 Q96MT0 163 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 PCDHGB1Q9Y5G3 927 aa13.11□□□□□ -0.31
C9orf3-217ENST00000479161 GMPPBQ9Y5P6 360 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms