RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CHIAQ9BZP6 476 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 SLC22A4Q9H015 551 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 RNF7Q9UBF6 113 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 CTSZQ9UBR2 303 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 A0A1B0GWJ7 208 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 GGT3PA6NGU5 568 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 A6NLC8 198 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 ZNF879B4DU55 563 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 P2RY10O00398 339 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 ADAM20O43506 726 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 OR10H3O60404 316 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 LIPFP07098 398 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 ZNF823P16415 610 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 PSMB10P40306 273 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 SMIM11AP58511 58 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 HOXA4Q00056 320 aaPredicted RBP11.01□□□□□ -0.65
VCL-205ENST00000478896 SRSF4Q08170 494 aaKnown RBP11.01□□□□□ -0.65
VCL-205ENST00000478896 KRTAP27-1Q3LI81 207 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 METTL11BQ5VVY1 283 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 OLFML2AQ68BL7 652 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 C8orf82Q6P1X6 216 aaPredicted RBP11.01□□□□□ -0.65
VCL-205ENST00000478896 HACD2Q6Y1H2 254 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 ZNF841Q6ZN19 808 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 NAA40Q86UY6 237 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 LNX2Q8N448 690 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 CCT8L2Q96SF2 557 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 TRIM36Q9NQ86 728 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 ADA2Q9NZK5 511 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 ABCD2Q9UBJ2 740 aa11.01□□□□□ -0.65
VCL-205ENST00000478896 TRRAPQ9Y4A5 3859 aa11□□□□□ -0.65
VCL-205ENST00000478896 TRAV38-1A0A0B4J264 116 aa11□□□□□ -0.65
VCL-205ENST00000478896 hCG_1807616A0A1W2PRN6 198 aa11□□□□□ -0.65
VCL-205ENST00000478896 CD300LBA8K4G0 201 aa11□□□□□ -0.65
VCL-205ENST00000478896 LGALS8O00214 317 aa11□□□□□ -0.65
VCL-205ENST00000478896 ARPC3O15145 178 aa11□□□□□ -0.65
VCL-205ENST00000478896 MELTFP08582 738 aa11□□□□□ -0.65
VCL-205ENST00000478896 PSME3P61289 254 aa11□□□□□ -0.65
VCL-205ENST00000478896 RSPO1Q2MKA7 263 aaPredicted RBP11□□□□□ -0.65
VCL-205ENST00000478896 ZBTB46Q86UZ6 589 aa11□□□□□ -0.65
VCL-205ENST00000478896 TMEM86BQ8N661 226 aa11□□□□□ -0.65
VCL-205ENST00000478896 FAM86B1Q8N7N1 296 aa11□□□□□ -0.65
VCL-205ENST00000478896 PNLDC1Q8NA58 520 aaKnown RBP11□□□□□ -0.65
VCL-205ENST00000478896 SCCPDHQ8NBX0 429 aa11□□□□□ -0.65
VCL-205ENST00000478896 OR4C15Q8NGM1 316 aa11□□□□□ -0.65
VCL-205ENST00000478896 OR2AE1Q8NHA4 323 aa11□□□□□ -0.65
VCL-205ENST00000478896 MCUR1Q96AQ8 359 aa11□□□□□ -0.65
VCL-205ENST00000478896 FAM71F1Q96KD3 344 aaPredicted RBP11□□□□□ -0.65
VCL-205ENST00000478896 C7orf34Q96L11 122 aa11□□□□□ -0.65
VCL-205ENST00000478896 DHRS1Q96LJ7 313 aa11□□□□□ -0.65
VCL-205ENST00000478896 PRDM13Q9H4Q3 707 aa11□□□□□ -0.65
VCL-205ENST00000478896 SPAG4Q9NPE6 437 aa11□□□□□ -0.65
VCL-205ENST00000478896 PNRC2Q9NPJ4 139 aaKnown RBP11□□□□□ -0.65
VCL-205ENST00000478896 ACOXLQ9NUZ1 547 aa11□□□□□ -0.65
VCL-205ENST00000478896 DCAF13Q9NV06 445 aaKnown RBP11□□□□□ -0.65
VCL-205ENST00000478896 C1RLQ9NZP8 487 aa11□□□□□ -0.65
VCL-205ENST00000478896 CYB5R1Q9UHQ9 305 aa11□□□□□ -0.65
VCL-205ENST00000478896 POMT1Q9Y6A1 747 aa11□□□□□ -0.65
VCL-205ENST00000478896 MGAM2Q2M2H8 2515 aa11□□□□□ -0.65
VCL-205ENST00000478896 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.99□□□□□ -0.65
VCL-205ENST00000478896 CLPSL1A2RUU4 121 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 OR6C68A6NDL8 312 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 OOEPA6NGQ2 149 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 M0QZ24 198 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 TNFRSF13BO14836 293 aaPredicted RBP10.99□□□□□ -0.65
VCL-205ENST00000478896 GMDSO60547 372 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 GRPP07492 148 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 IFNGR2P38484 337 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 RPS27P42677 84 aaKnown RBP10.99□□□□□ -0.65
VCL-205ENST00000478896 ZNF92Q03936 586 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.99□□□□□ -0.654e-7■■■■□ 20.3
VCL-205ENST00000478896 MZT1Q08AG7 82 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 PDCD1Q15116 288 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 SNAI3Q3KNW1 292 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 SLC35F1Q5T1Q4 408 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 RNF148Q8N7C7 305 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 PROKR2Q8NFJ6 384 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 OR52L1Q8NGH7 329 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 TBC1D15Q8TC07 691 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 SSMEM1Q8WWF3 244 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 LHX4Q969G2 390 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 MAP6Q96JE9 813 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 WDFY2Q96P53 400 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 TBX15Q96SF7 602 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 COPS4Q9BT78 406 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 TRIM15Q9C019 465 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 MRPL22Q9NWU5 206 aaKnown RBP10.99□□□□□ -0.65
VCL-205ENST00000478896 C1orf123Q9NWV4 160 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 KCNG2Q9UJ96 466 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 N6AMT1Q9Y5N5 214 aa10.99□□□□□ -0.65
VCL-205ENST00000478896 CENPVL3A0A0U1RRI6 287 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 TIMM23O14925 209 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 NDUFA2O43678 99 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 NDUFA7O95182 113 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 GYPAP02724 150 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 MMP9P14780 707 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 RRM2P31350 389 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 RELBQ01201 579 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 TAF13Q15543 124 aa10.98□□□□□ -0.65
VCL-205ENST00000478896 GLYATL3Q5SZD4 288 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms