RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 C8orf59Q8N0T1 100 aaPredicted RBP22.87■■□□□ 1.25
CCM2-211ENST00000478582 OR10H4Q8NGA5 316 aa22.87■■□□□ 1.25
CCM2-211ENST00000478582 OR52H1Q8NGJ2 320 aa22.87■■□□□ 1.25
CCM2-211ENST00000478582 LGALS12Q96DT0 336 aa22.87■■□□□ 1.25
CCM2-211ENST00000478582 SORCS2Q96PQ0 1159 aa22.87■■□□□ 1.25
CCM2-211ENST00000478582 CYSLTR2Q9NS75 346 aa22.87■■□□□ 1.25
CCM2-211ENST00000478582 ACOD1A6NK06 481 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 F12P00748 615 aaPredicted RBP22.86■■□□□ 1.25
CCM2-211ENST00000478582 MT-ND5P03915 603 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 ANOS1P23352 680 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 PSMA6P60900 246 aaKnown RBP22.86■■□□□ 1.25
CCM2-211ENST00000478582 ACTC1P68032 377 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 ACTA1P68133 377 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 ZNF684Q5T5D7 378 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 CNIH3Q8TBE1 160 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 FBLIM1Q8WUP2 373 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 SNX33Q8WV41 574 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 NEU4Q8WWR8 484 aaPredicted RBP22.86■■□□□ 1.25
CCM2-211ENST00000478582 TBX5Q99593 518 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 IKZF2Q9UKS7 526 aa22.86■■□□□ 1.25
CCM2-211ENST00000478582 C5orf63A6NC05 138 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 PSMD9O00233 223 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 XRCC2O43543 280 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 ANXA2P07355 339 aaKnown RBP22.85■■□□□ 1.25
CCM2-211ENST00000478582 ERCC1P07992 297 aaPredicted RBP22.85■■□□□ 1.25
CCM2-211ENST00000478582 SELEP16581 610 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 RIDAP52758 137 aaKnown RBP22.85■■□□□ 1.25
CCM2-211ENST00000478582 RAB40BQ12829 278 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 SMN1Q16637 294 aaKnown RBP22.85■■□□□ 1.25
CCM2-211ENST00000478582 CLEC12BQ2HXU8 276 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 ALKBH6Q3KRA9 238 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 GLYATL3Q5SZD4 288 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 SSX6Q7RTT6 188 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 ZCCHC24Q8N2G6 241 aaKnown RBP22.85■■□□□ 1.25
CCM2-211ENST00000478582 SPSB4Q96A44 273 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 REPIN1Q9BWE0 567 aaKnown RBP22.85■■□□□ 1.25
CCM2-211ENST00000478582 OPA3Q9H6K4 179 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 AMBNQ9NP70 447 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 NKIRAS2Q9NYR9 191 aa22.85■■□□□ 1.25
CCM2-211ENST00000478582 MRM2Q9UI43 246 aaKnown RBP22.85■■□□□ 1.25
CCM2-211ENST00000478582 C17orf100A8MU93 164 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 TIMM8AO60220 97 aaPredicted RBP22.84■■□□□ 1.25
CCM2-211ENST00000478582 SULT1C4O75897 302 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 NAT2P11245 290 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 MMP16P51512 607 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 ZNF85Q03923 595 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 CDK5R2Q13319 367 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 KLHL22Q53GT1 634 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 CLEC9AQ6UXN8 241 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 FAM57BQ71RH2 274 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 PGAP1Q75T13 922 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 ACBD7Q8N6N7 88 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 TTTY10Q9BZA0 68 aa22.84■■□□□ 1.25
CCM2-211ENST00000478582 PLSCR5A0PG75 271 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 IQCF6A8MYZ5 107 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 SMAD7O15105 426 aaKnown RBP22.83■■□□□ 1.25
CCM2-211ENST00000478582 FADS2O95864 444 aaKnown RBP22.83■■□□□ 1.25
CCM2-211ENST00000478582 ADH4P08319 380 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 ZNF92Q03936 586 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 ZMAT1Q5H9K5 638 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 C6orf52Q5T4I8 152 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 OR2T2Q6IF00 324 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 THAP5Q7Z6K1 395 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 SGK3Q96BR1 496 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 OR10A2Q9H208 303 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 RGCCQ9H4X1 137 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 FAM206AQ9NX38 181 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 ZNF319Q9P2F9 582 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 N6AMT1Q9Y5N5 214 aa22.83■■□□□ 1.25
CCM2-211ENST00000478582 TMEM269A0A1B0GVZ9 245 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 MAGEB4O15481 346 aaPredicted RBP22.82■■□□□ 1.24
CCM2-211ENST00000478582 TBX1O43435 398 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 SRSF10O75494 262 aaKnown RBP22.82■■□□□ 1.24
CCM2-211ENST00000478582 IGHA1P01876 353 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 KRT8P05787 483 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 VHLP40337 213 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 HSPA13P48723 471 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 ZNF81P51508 661 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 TNK1Q13470 666 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 ZNF829Q3KNS6 432 aaPredicted RBP22.82■■□□□ 1.24
CCM2-211ENST00000478582 PCGF3Q3KNV8 242 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 IZUMO2Q6UXV1 221 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 PLEKHG7Q6ZR37 379 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 DNM1P46Q6ZS02 220 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 MRPL21Q7Z2W9 205 aaKnown RBP22.82■■□□□ 1.24
CCM2-211ENST00000478582 OR2AE1Q8NHA4 323 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 PGAM5Q96HS1 289 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 TPK1Q9H3S4 243 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 BRD7Q9NPI1 651 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 ZDHHC8Q9ULC8 765 aa22.82■■□□□ 1.24
CCM2-211ENST00000478582 DAPL1A0PJW8 107 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 METTL15A6NJ78 407 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 LY6G6DO95868 133 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 KCTD20Q7Z5Y7 419 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 EGFL6Q8IUX8 553 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 OR8G5Q8NG78 346 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 OR52I1Q8NGK6 324 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 GTF3AQ92664 365 aaKnown RBP22.81■■□□□ 1.24
CCM2-211ENST00000478582 DIRC2Q96SL1 478 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 FGF20Q9NP95 211 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms