RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FLVCR2Q9UPI3 526 aa12.77□□□□□ -0.37
NPHP4-208ENST00000478423 OR6C6A6NF89 314 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 MSTNO14793 375 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 RER1O15258 196 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PRKACAP17612 351 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 S100A11P31949 105 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PLXDC2Q6UX71 529 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 NMNAT2Q9BZQ4 307 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 MYO16Q9Y6X6 1858 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 XRCC2O43543 280 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 ERGP11308 486 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF14P17017 642 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PLA2G7Q13093 441 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 ANKRD16Q6P6B7 361 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SMIM4Q8WVI0 70 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 C22orf15Q8WYQ4 148 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SLAMF9Q96A28 289 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SEH1LQ96EE3 360 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SDSLQ96GA7 329 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 RTL8AQ9BWD3 113 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 RNF212BA8MTL3 300 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 CRYAAP02489 173 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SERPINA7P05543 415 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 GABRB1P18505 474 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 ZFP36L2P47974 494 aaKnown RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SRPXP78539 464 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 LSMEM1Q8N8F7 131 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SUMF1Q8NBK3 374 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 LILRB4Q8NHJ6 448 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SLCO1B1Q9Y6L6 691 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 FIGNL2A6NMB9 653 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 NUPL2O15504 423 aaKnown RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PI3P19957 117 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 MVDP53602 400 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 UBE2MP61081 183 aaKnown RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 RPS27AP62979 156 aaKnown RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 UBA52P62987 128 aaKnown RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 OR8G1Q15617 311 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 OR56B2PQ8NGI1 322 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PTPMT1Q8WUK0 201 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PTDSS2Q9BVG9 487 aa12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PLEKHB1Q9UF11 243 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-208ENST00000478423 PMS2P1A4D2B8 440 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 BHLHE40O14503 412 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 GNB3P16520 340 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 INSM1Q01101 510 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-208ENST00000478423 DOK1Q99704 481 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 GDF15Q99988 308 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 TAS2R5Q9NYW4 299 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 SCN2AQ99250 2005 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 CENPVL1A0A0U1RR11 272 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 MGMTP16455 207 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 RAB6AP20340 208 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 S100PP25815 95 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 PTGER4P35408 488 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 DBPQ10586 325 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-208ENST00000478423 SSPNQ14714 243 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 KRBOX4Q5JUW0 171 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 TRILQ7L0X0 811 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 LGI3Q8N145 548 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 DMBX1Q8NFW5 382 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 UCK1Q9HA47 277 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 EXOGQ9Y2C4 368 aaKnown RBP12.75□□□□□ -0.37
NPHP4-208ENST00000478423 DTX4Q9Y2E6 619 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 TUSC2O75896 110 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 OR8B8Q15620 311 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF529Q6P280 563 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 TFAP2EQ6VUC0 442 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 OR51H1Q8NH63 302 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 C12orf10Q9HB07 376 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 LUZP4Q9P127 313 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 POLDIP2Q9Y2S7 368 aa12.75□□□□□ -0.37
NPHP4-208ENST00000478423 TCRBV16S1A1N1A0A5B0 115 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 TMEM200CA6NKL6 621 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 H7C1Q1 480 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 KLK10O43240 276 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 PTHLHP12272 177 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 FABP6P51161 128 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 FOXL2P58012 376 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 B3GNTL1Q67FW5 361 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-208ENST00000478423 MAMSTRQ6ZN01 415 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 DTWD2Q8NBA8 298 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 PTP4A1Q93096 173 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 KCNJ15Q99712 375 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 PRMT8Q9NR22 394 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-208ENST00000478423 ROS1P08922 2347 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 ANGPTL7O43827 346 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 MED6O75586 246 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 IFNA4P05014 189 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 RAD52P43351 418 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 SFRP5Q5T4F7 317 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 ATG4DQ86TL0 474 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-208ENST00000478423 C17orf50Q8WW18 174 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 OR5B12Q96R08 314 aa12.74□□□□□ -0.37
NPHP4-208ENST00000478423 GPA33Q99795 319 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms