RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PYCARD-AS1I3L0S3 204 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 M0R233 179 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ADAM10O14672 748 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 BCAT2O15382 392 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF208O43345 1280 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 GMFGO60234 142 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ALOX12BO75342 701 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SRSF10O75494 262 aaKnown RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 RGS11O94810 467 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR2A4O95047 310 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 GPANK1O95872 356 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PNPP00491 289 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 HRGP04196 525 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ALDOBP05062 364 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ISG15P05161 165 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 LPLP06858 475 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 HEXBP07686 556 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 CYC1P08574 325 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 MELTFP08582 738 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ITGA5P08648 1049 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF806P0C7X5 589 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 UBCP0CG48 685 aaKnown RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TMIGD3P0DMS9 266 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 GTF2F2P13984 249 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 GABRA1P14867 456 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 IGFBP3P17936 291 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ANXA7P20073 488 aaKnown RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ENPP1P22413 925 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 HTR2CP28335 458 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 CCKBRP32239 447 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 RPS27P42677 84 aaKnown RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 DNASE1L1P49184 302 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ARRB1P49407 418 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 CSNK1EP49674 416 aaKnown RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SELENOPP49908 381 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ZNF81P51508 661 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 AP2S1P53680 142 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 P2RX3P56373 397 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 STARD6P59095 220 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TAS2R19P59542 299 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 RAB14P61106 215 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TSPAN5P62079 268 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 RPS15P62841 145 aaKnown RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PUDPQ08623 228 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SNTA1Q13424 505 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 MELKQ14680 651 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OPCMLQ14982 345 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 MPPED2Q15777 294 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PCK2Q16822 640 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PCGF3Q3KNV8 242 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 C2orf76Q3KRA6 126 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A53Q5H9E4 307 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 C1orf100Q5SVJ3 147 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PRAMEF17Q5VTA0 474 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM244Q5VVB8 128 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM225Q6GV28 225 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR7E24Q6IFN5 339 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 RHBDD2Q6NTF9 364 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM71Q6P5X7 295 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TSSK4Q6SA08 328 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 LANCL3Q6ZV70 420 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 H1FNTQ75WM6 255 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SLC35D2Q76EJ3 337 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 COX15Q7KZN9 410 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 NDUFAF7Q7L592 441 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SLC36A1Q7Z2H8 476 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ANKRD37Q7Z713 158 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ADGRE4PQ86SQ3 457 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PRSS58Q8IYP2 241 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 FTMTQ8N4E7 242 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SPEM1Q8N4L4 309 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 NKAIN3Q8N8D7 197 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 TMEM229BQ8NBD8 167 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ZBTB34Q8NCN2 500 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ADPRHL1Q8NDY3 354 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 NFAM1Q8NET5 270 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SLC26A10Q8NG04 563 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR51D1Q8NGF3 324 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR51A4Q8NGJ6 313 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR5L2Q8NGL0 311 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR4C16Q8NGL9 310 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR1J4Q8NGS1 313 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR13C3Q8NGS6 347 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR6N1Q8NGY5 312 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 STT3BQ8TCJ2 826 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 GPX8Q8TED1 209 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 CCDC107Q8WV48 283 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 RNF138Q8WVD3 245 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 C17orf50Q8WW18 174 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ASB5Q8WWX0 329 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PIGKQ92643 395 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SLC25A28Q96A46 364 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 PTX4Q96A99 478 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 DDIT4LQ96D03 193 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 OR2A7Q96R45 310 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 SEC22CQ9BRL7 303 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 GINS4Q9BRT9 223 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 DPCDQ9BVM2 203 aaPredicted RBP4.39□□□□□ -1.71
SF3B6-202ENST00000478050 POTEKPQ9BYX7 375 aa4.39□□□□□ -1.71
SF3B6-202ENST00000478050 ULBP3Q9BZM4 244 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms