RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 RAB40BQ12829 278 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 GK2Q14410 553 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 ZNF829Q3KNS6 432 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 Q5PR19 223 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 PLEKHG7Q6ZR37 379 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 PGAP1Q75T13 922 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 KCTD20Q7Z5Y7 419 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 C8orf59Q8N0T1 100 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 ACBD7Q8N6N7 88 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 NRG4Q8WWG1 115 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 TFAP2CQ92754 450 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 PGAM5Q96HS1 289 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 SORCS2Q96PQ0 1159 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 POFUT1Q9H488 388 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 MRPS18AQ9NVS2 196 aaKnown RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 COPS3Q9UNS2 423 aa11.22□□□□□ -0.61
TOP3A-205ENST00000477508 EXOGQ9Y2C4 368 aaKnown RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 NOP16Q9Y3C1 178 aaKnown RBP11.22□□□□□ -0.61
TOP3A-205ENST00000477508 TMEM269A0A1B0GVZ9 245 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 A0A1W2PQL4 384 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-205ENST00000477508 IQCF6A8MYZ5 107 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 J3QRE1 110 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 ADH4P08319 380 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 TACSTD2P09758 323 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 NAT2P11245 290 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 TNFSF4P23510 183 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 MMP15P51511 669 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 MMP16P51512 607 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 SNCBQ16143 134 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 TIGD6Q17RP2 521 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 CLEC2AQ6UVW9 174 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 USP51Q70EK9 711 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 FAM57BQ71RH2 274 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 PRSS45Q7RTY3 260 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 OR13G1Q8NGZ3 307 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 SPSB4Q96A44 273 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 EGLN1Q9GZT9 426 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 SLC22A4Q9H015 551 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 MOB1AQ9H8S9 216 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 INPP5EQ9NRR6 644 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 N6AMT1Q9Y5N5 214 aa11.21□□□□□ -0.61
TOP3A-205ENST00000477508 ITPR3Q14573 2671 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 METTL15A6NJ78 407 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 TBX1O43435 398 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 SSX4O60224 188 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 NDUFS7O75251 213 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 WBP4O75554 376 aaKnown RBP11.2□□□□□ -0.62
TOP3A-205ENST00000477508 CLIC3O95833 236 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 SLC2A1P11166 492 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 ACTA2P62736 377 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 ACTG2P63267 376 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
TOP3A-205ENST00000477508 ZNF92Q03936 586 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 CDK5R2Q13319 367 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 HLXQ14774 488 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-205ENST00000477508 CLEC12BQ2HXU8 276 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 GLYATL3Q5SZD4 288 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 LCE2DQ5TA82 110 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-205ENST00000477508 OR2T2Q6IF00 324 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 FAM220AQ7Z4H9 259 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 THAP5Q7Z6K1 395 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 OR8G5Q8NG78 346 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 APH1BQ8WW43 257 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 SPRYD4Q8WW59 207 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-205ENST00000477508 LGALS12Q96DT0 336 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 TBX5Q99593 518 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 DECR2Q9NUI1 292 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 AASSQ9UDR5 926 aa11.2□□□□□ -0.62
TOP3A-205ENST00000477508 A0A0U1RQV5 110 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 LOC390937A0A1W2PQ73 354 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 GGT3PA6NGU5 568 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 CD300LBA8K4G0 201 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 LOC110117498-PIK3R3F6TDL0 507 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 NDUFS8O00217 210 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 PSMD9O00233 223 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 APOL3O95236 402 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 DAOP14920 347 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 VHLP40337 213 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 PDLIM4P50479 330 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 AQP4P55087 323 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 CSNK2BP67870 215 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 ALKBH6Q3KRA9 238 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 DNM1P46Q6ZS02 220 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 TGIF2LYQ8IUE0 185 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 KRTAP1-3Q8IUG1 177 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 ZCCHC24Q8N2G6 241 aaKnown RBP11.19□□□□□ -0.62
TOP3A-205ENST00000477508 FTMTQ8N4E7 242 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 YIPF7Q8N8F6 280 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 ZNF540Q8NDQ6 660 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 UBASH3BQ8TF42 649 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 FBLIM1Q8WUP2 373 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 SGK3Q96BR1 496 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 REEP6Q96HR9 211 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 SLC30A2Q9BRI3 323 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 RHNO1Q9BSD3 238 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
TOP3A-205ENST00000477508 AMBNQ9NP70 447 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms