RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 DEGS2Q6QHC5 323 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 Q6ZR03 302 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 AHSA2Q719I0 299 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 SNX33Q8WV41 574 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 RORBQ92753 470 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 HAVCR1Q96D42 359 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 PGAM5Q96HS1 289 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 LYZL4Q96KX0 146 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 SIGLEC11Q96RL6 698 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 ALG8Q9BVK2 526 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 G6PC2Q9NQR9 355 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 ACOXLQ9NUZ1 547 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 FAIMQ9NVQ4 179 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 FKBP14Q9NWM8 211 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 GNG8Q9UK08 70 aa13.57□□□□□ -0.24
COPS3-207ENST00000477299 PTGES3LE9PB15 166 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 H3BSH0 61 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 DENRO43583 198 aaKnown RBP13.56□□□□□ -0.24
COPS3-207ENST00000477299 ZNF254O75437 659 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 FADS2O95864 444 aaKnown RBP13.56□□□□□ -0.24
COPS3-207ENST00000477299 IGHV3-13P01766 116 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 KRT8P05787 483 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 GCH1P30793 250 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 KLF3P57682 345 aaPredicted RBP13.56□□□□□ -0.24
COPS3-207ENST00000477299 TNK1Q13470 666 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 GALEQ14376 348 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 ODF4Q2M2E3 257 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 OR2G6Q5TZ20 316 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 FBXW12Q6X9E4 464 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 PRSS35Q8N3Z0 413 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 C4orf36Q96KX1 117 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 VRK1Q99986 396 aaPredicted RBP13.56□□□□□ -0.24
COPS3-207ENST00000477299 REPIN1Q9BWE0 567 aaKnown RBP13.56□□□□□ -0.24
COPS3-207ENST00000477299 PBOV1Q9GZY1 135 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 TPK1Q9H3S4 243 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 PPP1R3EQ9H7J1 279 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 MSL2Q9HCI7 577 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 ERVK-18Q9QC07 812 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 PURGQ9UJV8 347 aaKnown RBP13.56□□□□□ -0.24
COPS3-207ENST00000477299 GTF2A1LQ9UNN4 478 aa13.56□□□□□ -0.24
COPS3-207ENST00000477299 A0A1W2PPW3 197 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 ZSCAN5BA6NJL1 495 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 VSTM5A8MXK1 200 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 H0YL77 283 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 TTRP02766 147 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 KIR3DL2P43630 455 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 MMP15P51511 669 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 NANOS3P60323 173 aaKnown RBP13.55□□□□□ -0.24
COPS3-207ENST00000477299 ACTC1P68032 377 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 ACTA1P68133 377 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 DEFB113Q30KQ7 82 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 ZNF540Q8NDQ6 660 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 BHLHE23Q8NDY6 225 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 OR5L1Q8NGL2 311 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 PELI1Q96FA3 418 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 PERPQ96FX8 193 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 TMEM80Q96HE8 168 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 REEP6Q96HR9 211 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 SORCS2Q96PQ0 1159 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 NIPAL2Q9H841 368 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 ITGB1BP2Q9UKP3 347 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 DIMT1Q9UNQ2 313 aaKnown RBP13.55□□□□□ -0.24
COPS3-207ENST00000477299 PCDHGB1Q9Y5G3 927 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 R4GMQ9 66 aa13.55□□□□□ -0.24
COPS3-207ENST00000477299 TIMM8AO60220 97 aaPredicted RBP13.54□□□□□ -0.24
COPS3-207ENST00000477299 SULT1C4O75897 302 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 LALBAP00709 142 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 IGHV4-39P01824 125 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 RAC2P15153 192 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 KITLGP21583 273 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 DCKP27707 260 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 DCTDP32321 178 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 PTH2RP49190 550 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 EVX1P49640 407 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 MMP16P51512 607 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 GTF2A1P52655 376 aaPredicted RBP13.54□□□□□ -0.24
COPS3-207ENST00000477299 SNRPD2P62316 118 aaKnown RBP13.54□□□□□ -0.24
COPS3-207ENST00000477299 FAM3AP98173 230 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 TIGD6Q17RP2 521 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 XAF1Q6GPH4 301 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 CATSPERDQ86XM0 798 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 RDH10Q8IZV5 341 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 SPRYD4Q8WW59 207 aaPredicted RBP13.54□□□□□ -0.24
COPS3-207ENST00000477299 PIGTQ969N2 578 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 ZNF701Q9NV72 531 aaPredicted RBP13.54□□□□□ -0.24
COPS3-207ENST00000477299 OR52A1Q9UKL2 312 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 SIRT4Q9Y6E7 314 aaPredicted RBP13.54□□□□□ -0.24
COPS3-207ENST00000477299 DYSFO75923 2080 aa13.54□□□□□ -0.24
COPS3-207ENST00000477299 A0A1B0GTI1 187 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 EFCAB10A6NFE3 127 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 LOC110117498-PIK3R3F6TDL0 507 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 J3QW42 95 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 P2RY10O00398 339 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 APOC1P02654 83 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 HLA-DPB1P04440 258 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 PIPP12273 146 aaPredicted RBP13.53□□□□□ -0.24
COPS3-207ENST00000477299 CRHBPP24387 322 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 ACKR3P25106 362 aa13.53□□□□□ -0.24
COPS3-207ENST00000477299 MAGEB1P43366 347 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms