RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ST7LQ8TDW4 575 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 ITLN1Q8WWA0 313 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 FAHD2AQ96GK7 314 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 OR2V2Q96R30 315 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 KCNJ15Q99712 375 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 GAL3ST1Q99999 423 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 PRRG3Q9BZD7 231 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 KRT84Q9NSB2 600 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 PPP1R3CQ9UQK1 317 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 AP4S1Q9Y587 144 aa13.68□□□□□ -0.22
COL1A1-205ENST00000476387 A0A0G2JMP0 313 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 A0A0X1KG70 313 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 J3QLI3 93 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 PRODHO43272 600 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 PLPP2O43688 288 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 SRP9P49458 86 aaKnown RBP13.67□□□□□ -0.22
COL1A1-205ENST00000476387 CRISP1P54107 249 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 RPS7P62081 194 aaKnown RBP13.67□□□□□ -0.22
COL1A1-205ENST00000476387 SPRNQ5BIV9 151 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 DPY19L4Q7Z388 723 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 ZDHHC13Q8IUH4 622 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 CPOQ8IVL8 374 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 PARP8Q8N3A8 854 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 ZNF283Q8N7M2 679 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 SEMA6DQ8NFY4 1073 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 OR4M2Q8NGB6 313 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 SPRYD4Q8WW59 207 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-205ENST00000476387 ZMYND19Q96E35 227 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-205ENST00000476387 TOR3AQ9H497 397 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 TMEM100Q9NV29 134 aa13.67□□□□□ -0.22
COL1A1-205ENST00000476387 G3V2T6 193 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 APOC1P02654 83 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 GATA3P23771 443 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 DAPP51397 102 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 RAD23AP54725 363 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 PRSS12P56730 875 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 SNAPC1Q16533 368 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 SNAI3Q3KNW1 292 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 SLC35D3Q5M8T2 416 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 TMEM236Q5W0B7 351 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 DUS3LQ96G46 650 aaKnown RBP13.66□□□□□ -0.22
COL1A1-205ENST00000476387 SLC30A2Q9BRI3 323 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 ABHD6Q9BV23 337 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 OPA3Q9H6K4 179 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 MARCH7Q9H992 704 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 TMEM106BQ9NUM4 274 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 ENOPH1Q9UHY7 261 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 NOP16Q9Y3C1 178 aaKnown RBP13.66□□□□□ -0.22
COL1A1-205ENST00000476387 N6AMT1Q9Y5N5 214 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 NPTNQ9Y639 398 aa13.66□□□□□ -0.22
COL1A1-205ENST00000476387 IFNL4K9M1U5 179 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 HAX1O00165 279 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 VENTXO95231 258 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 ANXA2P07355 339 aaKnown RBP13.65□□□□□ -0.22
COL1A1-205ENST00000476387 SLC2A1P11166 492 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 CX3CR1P49238 355 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 ESRRGP62508 458 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 C1orf229Q6ZS94 237 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-205ENST00000476387 USP43Q70EL4 1123 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 ZNF771Q7L3S4 317 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-205ENST00000476387 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 TIGD4Q8IY51 512 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 OR2AE1Q8NHA4 323 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 ZNF418Q8TF45 676 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-205ENST00000476387 RNF133Q8WVZ7 376 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 MEGF10Q96KG7 1140 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 TMPRSS13Q9BYE2 586 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 SP140LQ9H930 580 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 TVP23BQ9NYZ1 205 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 UBAP1Q9NZ09 502 aa13.65□□□□□ -0.22
COL1A1-205ENST00000476387 GGT3PA6NGU5 568 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 F5H5P2 479 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 MLNRO43193 412 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 TBX1O43435 398 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 XRCC2O43543 280 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 SELENOFO60613 162 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 LYNP07948 512 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 H2BFMP0C1H6 154 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 EPHA1P21709 976 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 NAA10P41227 235 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-205ENST00000476387 MMP16P51512 607 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 ZNF92Q03936 586 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 APOFQ13790 326 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 PTGES3Q15185 160 aaKnown RBP13.64□□□□□ -0.23
COL1A1-205ENST00000476387 GLYATL3Q5SZD4 288 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 LCN1P1Q5VSP4 162 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 DCAF12L2Q5VW00 463 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 ASRGL1Q7L266 308 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 C1QL2Q7Z5L3 287 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 SPICQ8N5J4 248 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 BBS1Q8NFJ9 593 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 LRTOMTQ8WZ04 291 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 SLC22A4Q9H015 551 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 GABARAPL1Q9H0R8 117 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 GCM1Q9NP62 436 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 DCAF16Q9NXF7 216 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 PCDHB10Q9UN67 800 aa13.64□□□□□ -0.23
COL1A1-205ENST00000476387 PPIAL4EA0A075B759 164 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms