RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 DVL1O14640 695 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 NDUFB2O95178 105 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 PTBP3O95758 552 aaKnown RBP10.38□□□□□ -0.75
SKA3-206ENST00000475251 PAHP00439 452 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 LCATP04180 440 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 GABRA5P31644 462 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 GPR4P46093 362 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 CENPAP49450 140 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 RPS6KA3P51812 740 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 RABL3Q5HYI8 236 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 COQ5Q5HYK3 327 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 PDZD9Q8IXQ8 264 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 MRAPQ8TCY5 172 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 SLCO4A1Q96BD0 722 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 GPX7Q96SL4 187 aaPredicted RBP10.38□□□□□ -0.75
SKA3-206ENST00000475251 PITX2Q99697 317 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 ATF6BQ99941 703 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 NUAK2Q9H093 628 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 NRIP3Q9NQ35 241 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 RHCGQ9UBD6 479 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 KAAG1Q9UBP8 84 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 RPUSD1Q9UJJ7 312 aaKnown RBP10.38□□□□□ -0.75
SKA3-206ENST00000475251 LHFPL6Q9Y693 200 aa10.38□□□□□ -0.75
SKA3-206ENST00000475251 A0A087WUU8 490 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
SKA3-206ENST00000475251 A6NLC8 198 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 FAM220BPB1ANY3 271 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 RNASEK-C17orf49H0YIS7 233 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 CDC42EP2O14613 210 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 XPNPEP2O43895 674 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 OR10H3O60404 316 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 GYPAP02724 150 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 ACSM4P0C7M7 580 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 CA6P23280 308 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 TPTEP56180 551 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 LOXL3P58215 753 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 SLC36A3Q495N2 470 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 METTL21CQ5VZV1 264 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 OTPQ5XKR4 325 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 OR2T12Q8NG77 320 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 OR2AJ1Q8NGZ0 328 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 ST8SIA4Q92187 359 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 SIKE1Q9BRV8 207 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 RASSF4Q9H2L5 321 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 ANKRD19PQ9H560 264 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 KRCC1Q9NPI7 259 aaPredicted RBP10.37□□□□□ -0.75
SKA3-206ENST00000475251 C14orf119Q9NWQ9 140 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 MRPL15Q9P015 296 aaKnown RBP10.37□□□□□ -0.75
SKA3-206ENST00000475251 ONECUT1Q9UBC0 465 aa10.37□□□□□ -0.75
SKA3-206ENST00000475251 hCG_1807616A0A1W2PRN6 198 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 CD300LBA8K4G0 201 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 BBIP1A8MTZ0 92 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 SOCS2O14508 198 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 GRK5P34947 590 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 GGT2P36268 569 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 MDH1P40925 334 aaKnown RBP10.36□□□□□ -0.75
SKA3-206ENST00000475251 YAP1P46937 504 aaKnown RBP10.36□□□□□ -0.75
SKA3-206ENST00000475251 TRAP1Q12931 704 aaKnown RBP10.36□□□□□ -0.75
SKA3-206ENST00000475251 KRTAP27-1Q3LI81 207 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 TEX36Q5VZQ5 186 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 SLC35E4Q6ICL7 350 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 DPY19L2P2Q6ZN68 376 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 SLC36A1Q7Z2H8 476 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.36□□□□□ -0.75
SKA3-206ENST00000475251 CYP4Z1Q86W10 505 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 FAM90A1Q86YD7 464 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 FAM234AQ9H0X4 552 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 PPA2Q9H2U2 334 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 C1orf123Q9NWV4 160 aa10.36□□□□□ -0.75
SKA3-206ENST00000475251 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 FXYD1O00168 92 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 NPFFO15130 113 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 PPP1R3DO95685 299 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 TXNDC12O95881 172 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 MUC1P15941 1255 aaPredicted RBP10.35□□□□□ -0.75
SKA3-206ENST00000475251 ZNF26P17031 533 aaPredicted RBP10.35□□□□□ -0.75
SKA3-206ENST00000475251 MAPRE2Q15555 327 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 MEP1BQ16820 701 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 MICBQ29980 383 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 RSPO1Q2MKA7 263 aaPredicted RBP10.35□□□□□ -0.75
SKA3-206ENST00000475251 AGBL2Q5U5Z8 902 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 CORO6Q6QEF8 472 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 TBPL2Q6SJ96 375 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 PTCHD4Q6ZW05 846 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 TSEN54Q7Z6J9 526 aaKnown RBP10.35□□□□□ -0.75
SKA3-206ENST00000475251 GCSAMQ8N6F7 178 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 LY6G5BQ8NDX9 201 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 OR4C13Q8NGP0 309 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 SPTSSAQ969W0 71 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 OPA3Q9H6K4 179 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 RAB18Q9NP72 206 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 NECAP2Q9NVZ3 263 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 GID8Q9NWU2 228 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 SIGLEC7Q9Y286 467 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 AP3M1Q9Y2T2 418 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 IER3IP1Q9Y5U9 82 aa10.35□□□□□ -0.75
SKA3-206ENST00000475251 J3KTA2 159 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 M0R135 149 aa10.34□□□□□ -0.75
SKA3-206ENST00000475251 BHLHE40O14503 412 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms