RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RAD23AP54725 363 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 MAB21L1Q13394 359 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 OR8B8Q15620 311 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 MPPED2Q15777 294 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TAF9Q16594 264 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 CD276Q5ZPR3 534 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 PTCHD4Q6ZW05 846 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TMPRSS11FQ6ZWK6 438 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 PDZD9Q8IXQ8 264 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 FAM156AQ8NDB6 213 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 DYRK2Q92630 601 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 LHX4Q969G2 390 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 MCUR1Q96AQ8 359 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 CLPTM1LQ96KA5 538 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 WDFY2Q96P53 400 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TSSK2Q96PF2 358 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TBX15Q96SF7 602 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 COQ7Q99807 217 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TCF7L1Q9HCS4 588 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 VSX1Q9NZR4 365 aaPredicted RBP11.61□□□□□ -0.55
CCDC78-209ENST00000474647 ERVK-18Q9QC07 812 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TMEM5Q9Y2B1 443 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 IER3IP1Q9Y5U9 82 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 LHFPL6Q9Y693 200 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 F5H5K5 113 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 ADAM20O43506 726 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 PSMB10P40306 273 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 CD200P41217 278 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 RPL15P61313 204 aaKnown RBP11.6□□□□□ -0.55
CCDC78-209ENST00000474647 GK2Q14410 553 aaPredicted RBP11.6□□□□□ -0.55
CCDC78-209ENST00000474647 OR8G1Q15617 311 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 KCNJ8Q15842 424 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 IFI44LQ53G44 452 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 CLEC12AQ5QGZ9 265 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 GPR139Q6DWJ6 353 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 PGM2L1Q6PCE3 622 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 FKBP9P1Q75LS8 142 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 ADCK1Q86TW2 530 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 LINC00346Q8IVM7 164 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 CELF2-AS1Q8N7Q2 184 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 PNLDC1Q8NA58 520 aaKnown RBP11.6□□□□□ -0.55
CCDC78-209ENST00000474647 LINC01006Q8NI28 216 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 Q8TCH9 128 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 SPRYD4Q8WW59 207 aaPredicted RBP11.6□□□□□ -0.55
CCDC78-209ENST00000474647 ADAT1Q9BUB4 502 aaKnown RBP11.6□□□□□ -0.55
CCDC78-209ENST00000474647 TRIM15Q9C019 465 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 RASSF4Q9H2L5 321 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 MUC13Q9H3R2 512 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 FN3KRPQ9HA64 309 aa11.6□□□□□ -0.55
CCDC78-209ENST00000474647 IGHV1-69DA0A0B4J2H0 117 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 SLC22A31A6NKX4 558 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 CXCR6O00574 342 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 IGHV1-69P01742 117 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 LCATP04180 440 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 LIPFP07098 398 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 MMP9P14780 707 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 CA6P23280 308 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 CRABP1P29762 137 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 RPS6KA3P51812 740 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 HIST1H3AP68431 136 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 MALLQ13021 153 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 KCNMB1Q16558 191 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 FGD3Q5JSP0 725 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 HIST2H3PS2Q5TEC6 136 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 DNM1P34Q6PK57 102 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 CFAP77Q6ZQR2 320 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 HIST2H3AQ71DI3 136 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 PGAP1Q75T13 922 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 MRPL21Q7Z2W9 205 aaKnown RBP11.59□□□□□ -0.55
CCDC78-209ENST00000474647 CYP4Z1Q86W10 505 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 FAM110DQ8TAY7 271 aaPredicted RBP11.59□□□□□ -0.55
CCDC78-209ENST00000474647 ERGIC1Q969X5 290 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 SLCO4A1Q96BD0 722 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 ASB9Q96DX5 294 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 RSRC1Q96IZ7 334 aaKnown RBP11.59□□□□□ -0.55
CCDC78-209ENST00000474647 HSH2DQ96JZ2 352 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 PITX2Q99697 317 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 ATF6BQ99941 703 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 SMURF1Q9HCE7 757 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 NRIP3Q9NQ35 241 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 RNF7Q9UBF6 113 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 MAGEL2Q9UJ55 1249 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 SIGLEC7Q9Y286 467 aa11.59□□□□□ -0.55
CCDC78-209ENST00000474647 DCTN6O00399 190 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 ARPC2O15144 300 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 GSTA4O15217 222 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 CLPXO76031 633 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 PPP1R3DO95685 299 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 SERPINA1P01009 418 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 ACSM4P0C7M7 580 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 NCK1P16333 377 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 CDKN2AP42771 156 aaKnown RBP11.58□□□□□ -0.56
CCDC78-209ENST00000474647 PROK1P58294 105 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 ARF6P62330 175 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 DBPQ10586 325 aaPredicted RBP11.58□□□□□ -0.56
CCDC78-209ENST00000474647 COX10Q12887 443 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 NAA40Q86UY6 237 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 SLC7A13Q8TCU3 470 aa11.58□□□□□ -0.56
CCDC78-209ENST00000474647 UTP4Q969X6 686 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms