RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 OR2T33Q8NG76 320 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 COPS4Q9BT78 406 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 TSSK6Q9BXA6 273 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 PLA2G12AQ9BZM1 189 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 OPA3Q9H6K4 179 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 REEP1Q9H902 201 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 ZNF69Q9UC07 566 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 COMMD3-BMI1R4GMX3 469 aa17.04■□□□□ 0.32
PDLIM4-206ENST00000474421 IGHV2-70DA0A0C4DH43 119 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 TVP23AA6NH52 213 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 CD300LBA8K4G0 201 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 IFNGP01579 166 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 CD80P33681 288 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 PMELP40967 661 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 PITPNBP48739 271 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 ENTPD1P49961 510 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 SLC25A1P53007 311 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 TAF13Q15543 124 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 KCNJ8Q15842 424 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 MICAQ29983 383 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 FAM98BQ52LJ0 330 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 KLF17Q5JT82 389 aaPredicted RBP17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 ZNF362Q5T0B9 420 aaPredicted RBP17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 LCN8Q6JVE9 175 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 DCDC5Q6ZRR9 648 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 DCXRQ7Z4W1 244 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 OR8D4Q8NGM9 314 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 OR10S1Q8NGN2 331 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 RAB40AQ8WXH6 277 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 NSL1Q96IY1 281 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 DGCR6LQ9BY27 220 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 FN3KRPQ9HA64 309 aa17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 MRPL15Q9P015 296 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 SAMHD1Q9Y3Z3 626 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-206ENST00000474421 TCRBV5S2A0A599 114 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 GGT3PA6NGU5 568 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 SPARCP09486 303 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 RPS27P42677 84 aaKnown RBP17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 PRSS12P56730 875 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 PAX2Q02962 417 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 ZNF92Q03936 586 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 MZT1Q08AG7 82 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 TRIM25Q14258 630 aaKnown RBP17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 GK3PQ14409 553 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 PCK2Q16822 640 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 SNAI3Q3KNW1 292 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 TEX30Q5JUR7 227 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 OR2T5Q6IEZ7 315 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 FITM2Q8N6M3 262 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 SPERTQ8NA61 448 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 OR51L1Q8NGJ5 315 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 OR2T29Q8NH02 315 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 KCNJ15Q99712 375 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 ADAT1Q9BUB4 502 aaKnown RBP17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 MS4A7Q9GZW8 240 aaPredicted RBP17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 CLN8Q9UBY8 286 aa17.02■□□□□ 0.32
PDLIM4-206ENST00000474421 RIIAD1A6NNX1 92 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 ZNF593O00488 134 aaPredicted RBP17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 PHYHO14832 338 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 FAM20BO75063 409 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 CA6P23280 308 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 PRTN3P24158 256 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 SLC15A1P46059 708 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 MTNR1AP48039 350 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 CRMP1Q14194 572 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 OR9Q1Q8NGQ5 310 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 ZNRF4Q8WWF5 429 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 UPRTQ96BW1 309 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 SLAMF6Q96DU3 332 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 NMNAT2Q9BZQ4 307 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 TRIM36Q9NQ86 728 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 CENPMQ9NSP4 180 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 UFSP2Q9NUQ7 469 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 RNF7Q9UBF6 113 aa17.01■□□□□ 0.31
PDLIM4-206ENST00000474421 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17■□□□□ 0.31
PDLIM4-206ENST00000474421 KIR2DS1A0A191URI9 304 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 ZNF878C9JN71 531 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 PTBP3O95758 552 aaKnown RBP17■□□□□ 0.31
PDLIM4-206ENST00000474421 ZNF3P17036 446 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 SPI1P17947 270 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 CALB2P22676 271 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 NPY4RP50391 375 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 GRB2P62993 217 aaKnown RBP17■□□□□ 0.31
PDLIM4-206ENST00000474421 FOXL1Q12952 345 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 BAMBIQ13145 260 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 AWAT1Q58HT5 328 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 FAM201AQ5SY85 155 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 GLYATL3Q5SZD4 288 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 PRAMEF6Q5VXH4 476 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 C9orf139Q6ZV77 190 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 PARP8Q8N3A8 854 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 ZNF511Q8NB15 262 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 OR6K6Q8NGW6 343 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 OR2AE1Q8NHA4 323 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 SGMS2Q8NHU3 365 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 DACT3Q96B18 629 aaPredicted RBP17■□□□□ 0.31
PDLIM4-206ENST00000474421 CCT8L2Q96SF2 557 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 SP140LQ9H930 580 aa17■□□□□ 0.31
PDLIM4-206ENST00000474421 PRPF19Q9UMS4 504 aaKnown RBP17■□□□□ 0.31
PDLIM4-206ENST00000474421 U3KQV3 271 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms