RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 TIMM10BQ9Y5J6 103 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 X6R8D5 127 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TVP23AA6NH52 213 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 DDTLA6NHG4 134 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC1A7O00341 560 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 GYG2O15488 501 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ITM2AO43736 263 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 CDC40O60508 579 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC25A27O95847 323 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 HAND1O96004 215 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 MPZP25189 248 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 GCAP28676 217 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SPRP35270 261 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 CX3CR1P49238 355 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 EFNB2P52799 333 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM132DQ14C87 1099 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 PRSS8Q16651 343 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ELFN2Q5R3F8 820 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 C6orf141Q5SZD1 244 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 AGBL4Q5VU57 503 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 FAM90A2PQ658T7 463 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 HIST2H2AA3Q6FI13 130 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 OGFOD2Q6N063 350 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC23A3Q6PIS1 610 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 CASP12Q6UXS9 341 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RNF111Q6ZNA4 994 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ATG4DQ86TL0 474 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SPEM1Q8N4L4 309 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 PNLDC1Q8NA58 520 aaKnown RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SYNPRQ8TBG9 265 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ZFAND1Q8TCF1 268 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 C2CD4CQ8TF44 421 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ASB10Q8WXI3 467 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 MRAP2Q96G30 205 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 DOK1Q99704 481 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TRIM51Q9BSJ1 452 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 KRTAP9-2Q9BYQ4 174 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RPF2Q9H7B2 306 aaKnown RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RDH14Q9HBH5 336 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 MSL2Q9HCI7 577 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 MED11Q9P086 117 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 THAP10Q9P2Z0 257 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 VPS29Q9UBQ0 182 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ST6GALNAC2Q9UJ37 374 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 PTPRFP10586 1907 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 USP9YO00507 2555 aaPredicted RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SSU72P8A0A1W2PR75 194 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SIRPB1O00241 398 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 MPZL2O60487 215 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC16A7O60669 478 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CUTAO60888 179 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 NDUFA10O95299 355 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 P04436 131 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CD37P11049 281 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 TDGF1P13385 188 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 FOLR2P14207 255 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC2A5P22732 501 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 NMBRP28336 390 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PCSK6P29122 969 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PTGER1P34995 402 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 XCR1P46094 333 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PAX9P55771 341 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 RPS15AP62244 130 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 NTHL1P78549 312 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 GAGE5Q13069 117 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 GAGE6Q13070 117 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 MAD2L1Q13257 205 aaPredicted RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 FCN2Q15485 313 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF77Q15935 545 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ISXQ2M1V0 245 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ACTL10Q5JWF8 245 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 C6orf52Q5T4I8 152 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 HENMT1Q5T8I9 393 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ANKRD34AQ69YU3 496 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 DCUN1D2Q6PH85 259 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PPP1R32Q7Z5V6 425 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC30A8Q8IWU4 369 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 LINC01465Q8N7H1 131 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 OR56B4Q8NH76 319 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SFXN5Q8TD22 340 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 TOMM40LQ969M1 308 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 SEH1LQ96EE3 360 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 MRPL53Q96EL3 112 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 CACYBPQ9HB71 228 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ADGRL4Q9HBW9 690 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 AMBNQ9NP70 447 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 C14orf105Q9NVL8 296 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 RCC2Q9P258 522 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF107Q9UII5 783 aaPredicted RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 DHDHQ9UQ10 334 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 APC2O95996 2303 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PTPRSQ13332 1948 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 PATJQ8NI35 1801 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF236Q9UL36 1845 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 A0A096LPI6 279 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 KIR2DS1A0A191URI9 304 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ASPDHA6ND91 283 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 MYADML2A6NDP7 307 aa5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ARPC1BO15143 372 aaKnown RBP5.35□□□□□ -1.55
SMARCE1-208ENST00000474246 ERI3O43414 337 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms