RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 HSPE1-MOB4S4R3N1 261 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 CCDC182A6NF36 153 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 OR6C6A6NF89 314 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 B4DSR2 109 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 SPRY3O43610 288 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 ENTPD6O75354 484 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 CLIC3O95833 236 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 NGFP01138 241 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 MRPL3P09001 348 aaKnown RBP15.87■□□□□ 0.13
CCDC171-206ENST00000474193 SRD5A1P18405 259 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 TNFSF4P23510 183 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 CDH15P55291 814 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 ECH1Q13011 328 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 EIF2B1Q14232 305 aaKnown RBP15.87■□□□□ 0.13
CCDC171-206ENST00000474193 TAF13Q15543 124 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 RFPL4BQ6ZWI9 263 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 VASH1Q7L8A9 365 aaPredicted RBP15.87■□□□□ 0.13
CCDC171-206ENST00000474193 DPY19L4Q7Z388 723 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 DCXRQ7Z4W1 244 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 PEG10Q86TG7 708 aaKnown RBP15.87■□□□□ 0.13
CCDC171-206ENST00000474193 TIGD4Q8IY51 512 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 OR1F12Q8NHA8 337 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 TFAP2CQ92754 450 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 RAB1CQ92928 201 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 HAO2Q9NYQ3 351 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 ATPIF1Q9UII2 106 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 LAMP5Q9UJQ1 280 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 TMEM14AQ9Y6G1 99 aa15.87■□□□□ 0.13
CCDC171-206ENST00000474193 CLDN25C9JDP6 229 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 J3QW42 95 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 SELENOFO60613 162 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 NCR1O76036 304 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 MPV17P39210 176 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 RPS27P42677 84 aaKnown RBP15.86■□□□□ 0.13
CCDC171-206ENST00000474193 MTNR1AP48039 350 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 PCK2Q16822 640 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 FAM120AOSQ5T036 256 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 USP51Q70EK9 711 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 OR51G2Q8NGK0 314 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 THEM6Q8WUY1 208 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 YIPF5Q969M3 257 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 YIPF3Q9GZM5 350 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 NARFLQ9H6Q4 476 aa15.86■□□□□ 0.13
CCDC171-206ENST00000474193 MALRD1Q5VYJ5 2156 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 LYNP07948 512 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 SLC15A1P46059 708 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 MMP15P51511 669 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 HIST1H3AP68431 136 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 CCDC92Q53HC0 331 aaPredicted RBP15.85■□□□□ 0.13
CCDC171-206ENST00000474193 HIST2H3PS2Q5TEC6 136 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 CFAP77Q6ZQR2 320 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 HIST2H3AQ71DI3 136 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 THAP5Q7Z6K1 395 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 GLCCI1Q86VQ1 547 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 OTOSQ8NHW6 89 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 SPTSSAQ969W0 71 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 MNTQ99583 582 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 COQ7Q99807 217 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 ATF6BQ99941 703 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 Q9H521 79 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 CENPMQ9NSP4 180 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 RPL36Q9Y3U8 105 aaKnown RBP15.85■□□□□ 0.13
CCDC171-206ENST00000474193 PCDHGB1Q9Y5G3 927 aa15.85■□□□□ 0.13
CCDC171-206ENST00000474193 PHYHO14832 338 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 IGHV1-46P01743 117 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 GABRB1P18505 474 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 TNFRSF1AP19438 455 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 SRP14P37108 136 aaKnown RBP15.84■□□□□ 0.13
CCDC171-206ENST00000474193 PSG7Q13046 419 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 CR1LQ2VPA4 569 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.84■□□□□ 0.13
CCDC171-206ENST00000474193 SLC35F2Q8IXU6 374 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 CLDND2Q8NHS1 167 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 ASB17Q8WXJ9 295 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 CCL17Q92583 94 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 RAB39BQ96DA2 213 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 CMBLQ96DG6 245 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 SLAMF6Q96DU3 332 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 RNFT2Q96EX2 444 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 COPS4Q9BT78 406 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 AASSQ9UDR5 926 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 STARD10Q9Y365 291 aa15.84■□□□□ 0.13
CCDC171-206ENST00000474193 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC171-206ENST00000474193 ZNF878C9JN71 531 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 ZNF670-ZNF695F2Z2N8 137 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 RP2O75695 350 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 ADH4P08319 380 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 GNAO1P09471 354 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 SBK2P0C263 348 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 HSD11B1P28845 292 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 IL2RGP31785 369 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 DVL1P1P54792 670 aaPredicted RBP15.83■□□□□ 0.12
CCDC171-206ENST00000474193 ISL1P61371 349 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 TNFAIP6P98066 277 aaPredicted RBP15.83■□□□□ 0.12
CCDC171-206ENST00000474193 MVKQ03426 396 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 KLHL22Q53GT1 634 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 KCTD18Q6PI47 426 aaPredicted RBP15.83■□□□□ 0.12
CCDC171-206ENST00000474193 APOBEC3DQ96AK3 386 aaPredicted RBP15.83■□□□□ 0.12
CCDC171-206ENST00000474193 HAVCR1Q96D42 359 aa15.83■□□□□ 0.12
CCDC171-206ENST00000474193 C1orf159Q96HA4 380 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms