RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 AVPP01185 164 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 PRR23D2P0DMB1 279 aaPredicted RBP15.09■□□□□ 0.01
UPF3A-203ENST00000474056 GSTT1P30711 240 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 ZMYND11Q15326 602 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 KRTAP24-1Q3LI83 254 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 TMEM155Q4W5P6 130 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 PLBD1Q6P4A8 553 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 SHQ1Q6PI26 577 aaKnown RBP15.09■□□□□ 0.01
UPF3A-203ENST00000474056 C1orf229Q6ZS94 237 aaPredicted RBP15.09■□□□□ 0.01
UPF3A-203ENST00000474056 TMEM158Q8WZ71 300 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 ZMYND19Q96E35 227 aaPredicted RBP15.09■□□□□ 0.01
UPF3A-203ENST00000474056 METTL17Q9H7H0 456 aaPredicted RBP15.09■□□□□ 0.01
UPF3A-203ENST00000474056 PCDHB10Q9UN67 800 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 N6AMT1Q9Y5N5 214 aa15.09■□□□□ 0.01
UPF3A-203ENST00000474056 CD300LBA8K4G0 201 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 PAICSP22234 425 aaKnown RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 ZFP36P26651 326 aaKnown RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 SEC61A1P61619 476 aaKnown RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 LCN2P80188 198 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 MAB21L1Q13394 359 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 TMEM236Q5W0B7 351 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 MOGAT3Q86VF5 341 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 LRRC28Q86X40 367 aaPredicted RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 TIGD4Q8IY51 512 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 SPICQ8N5J4 248 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 SPATA3Q8NHX4 192 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 SPRYD4Q8WW59 207 aaPredicted RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 UTP4Q969X6 686 aaKnown RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 AMELYQ99218 206 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 ABHD6Q9BV23 337 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 REPIN1Q9BWE0 567 aaKnown RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 TMPRSS13Q9BYE2 586 aa15.08■□□□□ 0
UPF3A-203ENST00000474056 PATZ1Q9HBE1 687 aaKnown RBP15.08■□□□□ 0
UPF3A-203ENST00000474056 LOC105371242A0A075B767 164 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 A0A0G2JMP0 313 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 A0A0X1KG70 313 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 ZNF205O95201 554 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 HMGN1P05114 100 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 MDH2P40926 338 aaKnown RBP15.07■□□□□ 0
UPF3A-203ENST00000474056 PMELP40967 661 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 CD200P41217 278 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 CX3CR1P49238 355 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 GRB2P62993 217 aaKnown RBP15.07■□□□□ 0
UPF3A-203ENST00000474056 KLHL12Q53G59 568 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 DCAF12L2Q5VW00 463 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 PRAMEF6Q5VXH4 476 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 CPOQ8IVL8 374 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 KLHL36Q8N4N3 616 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 BBS1Q8NFJ9 593 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 OR4M2Q8NGB6 313 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 RNF133Q8WVZ7 376 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 DVL3Q92997 716 aaPredicted RBP15.07■□□□□ 0
UPF3A-203ENST00000474056 NRBF2Q96F24 287 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 SLC25A19Q9HC21 320 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 DNAJC27Q9NZQ0 273 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 KIF17Q9P2E2 1029 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 METRNQ9UJH8 293 aa15.07■□□□□ 0
UPF3A-203ENST00000474056 GGT3PA6NGU5 568 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 CEACAM18A8MTB9 384 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 F5H0A9 414 aaPredicted RBP15.06■□□□□ 0
UPF3A-203ENST00000474056 IFNL4K9M1U5 179 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 TBX1O43435 398 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 SELENOFO60613 162 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 ATP5HO75947 161 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 ANXA2P07355 339 aaKnown RBP15.06■□□□□ 0
UPF3A-203ENST00000474056 CA6P23280 308 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 HSD11B1P28845 292 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 GATA4P43694 442 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 SLC15A1P46059 708 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 RASSF2P50749 326 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 DAPP51397 102 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 RAD23AP54725 363 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 OR8G1Q15617 311 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 ZNF181Q2M3W8 571 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 FAM201AQ5SY85 155 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 SHFQ7M4L6 423 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 RFLNBQ8N5W9 214 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 OR56B2PQ8NGI1 322 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 OR5K1Q8NHB7 308 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 TOR3AQ9H497 397 aa15.06■□□□□ 0
UPF3A-203ENST00000474056 PAPOLBQ9NRJ5 636 aaKnown RBP15.06■□□□□ 0
UPF3A-203ENST00000474056 PRODHO43272 600 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 XRCC2O43543 280 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 FOXH1O75593 365 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 ADRA2CP18825 462 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 SLC2A5P22732 501 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 OPRL1P41146 370 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 NAA10P41227 235 aaPredicted RBP15.05■□□□□ -0
UPF3A-203ENST00000474056 CRISP1P54107 249 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 FAHD1Q6P587 224 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 PRSS45Q7RTY3 260 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 MUC20Q8N307 709 aaPredicted RBP15.05■□□□□ -0
UPF3A-203ENST00000474056 CELF2-AS1Q8N7Q2 184 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 OTOSQ8NHW6 89 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 SPSB4Q96A44 273 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 PLEKHA8Q96JA3 519 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 ADAT1Q9BUB4 502 aaKnown RBP15.05■□□□□ -0
UPF3A-203ENST00000474056 TMEM165Q9HC07 324 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 UFSP2Q9NUQ7 469 aa15.05■□□□□ -0
UPF3A-203ENST00000474056 TVP23BQ9NYZ1 205 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms