RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 LOC102725191A0A1B0GVB3 256 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 A0A1W2PQ72 361 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 A0A1W2PQM1 296 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PRR32B1ATL7 298 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 NPIPA2E9PIF3 369 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 NPIPA3F8WFD2 350 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 NOS1APO75052 506 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PMS2P2O95744 297 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 P04436 131 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 GP1BAP07359 652 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 GIPP09681 153 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 UBBP0CG47 229 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF17P17021 662 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF24P17028 368 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 BDKRB2P30411 391 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PTGS2P35354 604 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 RPS27P42677 84 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 VEGFCP49767 419 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF84P51523 738 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 AGFG1P52594 562 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 DSCR4P56555 118 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 GNG2P59768 71 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 IFITM2Q01629 132 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 MFGE8Q08431 387 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 DMWDQ09019 674 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 EIF3IQ13347 325 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ARL6IP1Q15041 203 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PCK2Q16822 640 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 C2orf76Q3KRA6 126 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 GLYATL3Q5SZD4 288 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PDSS1Q5T2R2 415 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 RAET1LQ5VY80 246 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 LIN54Q6MZP7 749 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM81Q6P7N7 255 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 C11orf88Q6PI97 169 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ARSKQ6UWY0 536 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 GLDNQ6ZMI3 551 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 UTS2BQ765I0 119 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF584Q8IVC4 421 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 SPICQ8N5J4 248 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PNLDC1Q8NA58 520 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 OR1M1Q8NGA1 313 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 OR10G3Q8NGC4 313 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 OR51D1Q8NGF3 324 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 OR8H1Q8NGG4 311 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 OR1J4Q8NGS1 313 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ELP5Q8TE02 316 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 RNF138Q8WVD3 245 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ASB5Q8WWX0 329 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 C11orf40Q8WZ69 217 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 INTS12Q96CB8 462 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 SLAMF6Q96DU3 332 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ARL5BQ96KC2 179 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 SGCZQ96LD1 299 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 CLUHP3Q96NS8 147 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 FOXN4Q96NZ1 517 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 RASL10BQ96S79 203 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 GFI1Q99684 422 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 FOXB1Q99853 325 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PRRT1Q99946 306 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 SLC25A21Q9BQT8 299 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PIGQQ9BRB3 760 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 UQCC2Q9BRT2 126 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF700Q9H0M5 742 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 EXO5Q9H790 373 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 IFT46Q9NQC8 304 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PRMT8Q9NR22 394 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 MRPL22Q9NWU5 206 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 SLC39A1Q9NY26 324 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 TAS2R4Q9NYW5 299 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 MRPL15Q9P015 296 aaKnown RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ABI3Q9P2A4 366 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 MGAT4CQ9UBM8 478 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ING1Q9UK53 422 aaPredicted RBP5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 FBXL3Q9UKT7 428 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 SLC22A13Q9Y226 551 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 PLEKHA6Q9Y2H5 1048 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 ZDBF2Q9HCK1 2354 aa5.21□□□□□ -1.58
ATPAF1-204ENST00000474020 THADAQ6YHU6 1953 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 IGHV1-45A0A0A0MS14 117 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 A0A1B0GTH9 108 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TMEM272A0A1B0GTI8 110 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 AQP7P3A6NL99 342 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ZNF736B4DX44 427 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 B4E171 279 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 M0R233 179 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 P2RY10O00398 339 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 DNPH1O43598 174 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 MTRF1O75570 445 aaKnown RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 RGS11O94810 467 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 RAB3DO95716 219 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 GPANK1O95872 356 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 IFNA6P05013 189 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TPOP07202 933 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 CHRM2P08172 466 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 HLA-DOBP13765 273 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 GABRA1P14867 456 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 IGFBP3P17936 291 aaPredicted RBP5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 ADRA2CP18825 462 aa5.2□□□□□ -1.58
ATPAF1-204ENST00000474020 TBPP20226 339 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms