RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ZNF829Q3KNS6 432 aaPredicted RBP10.6□□□□□ -0.71
DDX56-209ENST00000473924 PCGF3Q3KNV8 242 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 TMEM255AQ5JRV8 349 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 GLYATL3Q5SZD4 288 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 CLEC2AQ6UVW9 174 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 SPNS3Q6ZMD2 512 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 ZNF525Q8N782 197 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 YIPF7Q8N8F6 280 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 BHLHE23Q8NDY6 225 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 OR2AE1Q8NHA4 323 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 CNIH3Q8TBE1 160 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 APH1BQ8WW43 257 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 OR10A2Q9H208 303 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 MSL2Q9HCI7 577 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 GTF2A1LQ9UNN4 478 aa10.6□□□□□ -0.71
DDX56-209ENST00000473924 RPL36Q9Y3U8 105 aaKnown RBP10.6□□□□□ -0.71
DDX56-209ENST00000473924 PRRC2AP48634 2157 aaKnown RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 TMEM269A0A1B0GVZ9 245 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 GGT3PA6NGU5 568 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 ZSCAN5BA6NJL1 495 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 PRR32B1ATL7 298 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 H0YJX3 145 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 MAGEB4O15481 346 aaPredicted RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 FADS2O95864 444 aaKnown RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 DAOP14920 347 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 DCTDP32321 178 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 MAGEB1P43366 347 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 AQP4P55087 323 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 PRSS12P56730 875 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 DSCR9P59020 149 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 CCL8P80075 99 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 TSTQ16762 297 aaKnown RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 KLHL22Q53GT1 634 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 C6orf52Q5T4I8 152 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 PLEKHG7Q6ZR37 379 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 SSX6Q7RTT6 188 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 FAM220AQ7Z4H9 259 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 OR8G5Q8NG78 346 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 SPRYD4Q8WW59 207 aaPredicted RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 FAM168AQ92567 244 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 GTF3AQ92664 365 aaKnown RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 LGALS12Q96DT0 336 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 REEP6Q96HR9 211 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 DIRC2Q96SL1 478 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 RHNO1Q9BSD3 238 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 OPA3Q9H6K4 179 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 MYOZ1Q9NP98 299 aaPredicted RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 ZDHHC8Q9ULC8 765 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 EXOGQ9Y2C4 368 aaKnown RBP10.59□□□□□ -0.71
DDX56-209ENST00000473924 HSPE1-MOB4S4R3N1 261 aa10.59□□□□□ -0.71
DDX56-209ENST00000473924 METTL15A6NJ78 407 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 IQCF6A8MYZ5 107 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 LOC110117498-PIK3R3F6TDL0 507 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 WBP4O75554 376 aaKnown RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 RPP14O95059 124 aaKnown RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 IGHV1-46P01743 117 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 GNAO1P09471 354 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 CSF3P09919 207 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 ANOS1P23352 680 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 TNFSF4P23510 183 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 CFL1P23528 166 aaKnown RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 PDLIM4P50479 330 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 ISL1P61371 349 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 RAB40BQ12829 278 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 SMN1Q16637 294 aaKnown RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 FAM209AQ5JX71 171 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 IZUMO2Q6UXV1 221 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 PRSS45Q7RTY3 260 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 TGIF2LYQ8IUE0 185 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 ACBD7Q8N6N7 88 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 OR2Z1Q8NG97 314 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 UBASH3BQ8TF42 649 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 TFAP2CQ92754 450 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 SGK3Q96BR1 496 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 MRPL48Q96GC5 212 aaKnown RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 MYCBPQ99417 103 aaPredicted RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 REPIN1Q9BWE0 567 aaKnown RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 EGLN1Q9GZT9 426 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 RGCCQ9H4X1 137 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 SAP30LQ9HAJ7 183 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 NKIRAS2Q9NYR9 191 aa10.58□□□□□ -0.72
DDX56-209ENST00000473924 MRM2Q9UI43 246 aaKnown RBP10.58□□□□□ -0.72
DDX56-209ENST00000473924 OTOGQ6ZRI0 2925 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 ACOD1A6NK06 481 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 CD300LBA8K4G0 201 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 SULT1C4O75897 302 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 HPXP02790 462 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 TACSTD2P09758 323 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 HSPA13P48723 471 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 MMP16P51512 607 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 TNFAIP6P98066 277 aaPredicted RBP10.57□□□□□ -0.72
DDX56-209ENST00000473924 ZNF85Q03923 595 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 TNK1Q13470 666 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 TP53I3Q53FA7 332 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 COMMD2Q86X83 199 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 OR8B12Q8NGG6 310 aa10.57□□□□□ -0.72
DDX56-209ENST00000473924 OR13G1Q8NGZ3 307 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms