RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 NAA40Q86UY6 237 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 C1orf87Q8N0U7 546 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 MUC20Q8N307 709 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-226ENST00000473066 MDFIQ99750 246 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 PRRG3Q9BZD7 231 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
MRPL55-226ENST00000473066 MMADHCQ9H3L0 296 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-226ENST00000473066 ARHGAP32A7KAX9 2087 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 F5H5P2 479 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 MLNRO43193 412 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 PRODHO43272 600 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 TBX1O43435 398 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 FOXH1O75593 365 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 ANXA2P07355 339 aaKnown RBP13.16□□□□□ -0.3
MRPL55-226ENST00000473066 PRKACGP22612 351 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 MDH2P40926 338 aaKnown RBP13.16□□□□□ -0.3
MRPL55-226ENST00000473066 CX3CR1P49238 355 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 OR8G1Q15617 311 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 SNAI3Q3KNW1 292 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 LINC01590Q5TEZ4 76 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 DCAF12L2Q5VW00 463 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 FAHD2BQ6P2I3 314 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-226ENST00000473066 OR11L1Q8NGX0 322 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 OR5K1Q8NHB7 308 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 ZMYND19Q96E35 227 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-226ENST00000473066 FAHD2AQ96GK7 314 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 ADAT1Q9BUB4 502 aaKnown RBP13.16□□□□□ -0.3
MRPL55-226ENST00000473066 SLC25A19Q9HC21 320 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 GCM1Q9NP62 436 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 PAPOLBQ9NRJ5 636 aaKnown RBP13.16□□□□□ -0.3
MRPL55-226ENST00000473066 DCAF16Q9NXF7 216 aa13.16□□□□□ -0.3
MRPL55-226ENST00000473066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-226ENST00000473066 CD300LBA8K4G0 201 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 H0YL77 283 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 PLPP2O43688 288 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 H2BFMP0C1H6 154 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 SLC2A1P11166 492 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 PSKH1P11801 424 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 FCGR1AP12314 374 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 GLYATL3Q5SZD4 288 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 LCN1P1Q5VSP4 162 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 LIPNQ5VXI9 398 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 MOGAT3Q86VF5 341 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-226ENST00000473066 ZNF420Q8TAQ5 688 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-226ENST00000473066 ABHD6Q9BV23 337 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 METTL17Q9H7H0 456 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-226ENST00000473066 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
MRPL55-226ENST00000473066 ATRQ13535 2644 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 IGHV3-64DA0A0J9YX35 117 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 TMEM178BH3BS89 294 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 J3QLI3 93 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 HLA-DPB1P04440 258 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 LYNP07948 512 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 GATA3P23771 443 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 FASP25445 335 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 LCN2P80188 198 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 CDK5Q00535 292 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 ZNF92Q03936 586 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 MZT1Q08AG7 82 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 ZMYND11Q15326 602 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 ESCO2Q56NI9 601 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 SLC35D3Q5M8T2 416 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 CPOQ8IVL8 374 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 RFLNBQ8N5W9 214 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 CELF2-AS1Q8N7Q2 184 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 ZNF454Q8N9F8 522 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 RNF133Q8WVZ7 376 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 ERGIC1Q969X5 290 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 MARCH7Q9H992 704 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 PATZ1Q9HBE1 687 aaKnown RBP13.14□□□□□ -0.31
MRPL55-226ENST00000473066 KRT84Q9NSB2 600 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 DNAJC27Q9NZQ0 273 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 ENOPH1Q9UHY7 261 aa13.14□□□□□ -0.31
MRPL55-226ENST00000473066 TCF21O43680 179 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 SELENOFO60613 162 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 CYB5R3P00387 301 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-226ENST00000473066 RPS2P15880 293 aaKnown RBP13.13□□□□□ -0.31
MRPL55-226ENST00000473066 CA6P23280 308 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 CFL1P23528 166 aaKnown RBP13.13□□□□□ -0.31
MRPL55-226ENST00000473066 CD200P41217 278 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-226ENST00000473066 CRISP1P54107 249 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 ATP6AP1Q15904 470 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 ZNF181Q2M3W8 571 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 FAHD1Q6P587 224 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 LRRC28Q86X40 367 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-226ENST00000473066 TIGD4Q8IY51 512 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 PARP8Q8N3A8 854 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 OR56B2PQ8NGI1 322 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 OR52H1Q8NGJ2 320 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 THEM6Q8WUY1 208 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 PGAM5Q96HS1 289 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 SIGLEC11Q96RL6 698 aa13.13□□□□□ -0.31
MRPL55-226ENST00000473066 REPIN1Q9BWE0 567 aaKnown RBP13.13□□□□□ -0.31
MRPL55-226ENST00000473066 OR10A2Q9H208 303 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms