RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PGA5P0DJD9 388 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 CTRB1P17538 263 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 RAB4AP20338 218 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 USF1P22415 310 aaPredicted RBP2.75□□□□□ -1.97
CLK1-209ENST00000472679 CD70P32970 193 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 TALDO1P37837 337 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 EIF1P41567 113 aaKnown RBP2.75□□□□□ -1.97
CLK1-209ENST00000472679 SYKP43405 635 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 RAB7AP51149 207 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 ZNF121P58317 390 aaPredicted RBP2.75□□□□□ -1.97
CLK1-209ENST00000472679 BEX3Q00994 111 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 LRRC74AQ0VAA2 488 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 OR4M1Q8NGD0 313 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 OR1J4Q8NGS1 313 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 C18orf15Q96N68 181 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 ZYG11BQ9C0D3 744 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 DHX35Q9H5Z1 703 aaKnown RBP2.75□□□□□ -1.97
CLK1-209ENST00000472679 GEMIN7Q9H840 131 aaKnown RBP2.75□□□□□ -1.97
CLK1-209ENST00000472679 RABL2BQ9UNT1 228 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 TMEM120BA0PK00 339 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 TEX46H3BTG2 121 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 NME4O00746 187 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 PAHP00439 452 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 OXTP01178 125 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 HBE1P02100 147 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 CLTAP09496 248 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 PGA4P0DJD7 388 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 PGA3P0DJD8 388 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 STOMP27105 288 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 ILKQ13418 452 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 PNOCQ13519 176 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 FAM222AQ5U5X8 452 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 H3F3CQ6NXT2 135 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 SPESP1Q6UW49 350 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 CENPQQ7L2Z9 268 aaPredicted RBP2.74□□□□□ -1.97
CLK1-209ENST00000472679 CALHM3Q86XJ0 350 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 DYNLL2Q96FJ2 89 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 UQCC2Q9BRT2 126 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 ZNF442Q9H7R0 627 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 MRM3Q9HC36 420 aaKnown RBP2.74□□□□□ -1.97
CLK1-209ENST00000472679 RHBDL2Q9NX52 303 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 PDP1Q9P0J1 537 aaPredicted RBP2.74□□□□□ -1.97
CLK1-209ENST00000472679 GCNT4Q9P109 453 aa2.74□□□□□ -1.97
CLK1-209ENST00000472679 DHCR7Q9UBM7 475 aaKnown RBP2.74□□□□□ -1.97
CLK1-209ENST00000472679 IGHV3OR16-8A0A075B7F1 116 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 IGHV3-49A0A0A0MS15 119 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 CTAGE15A4D2H0 777 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 TNFRSF11BO00300 401 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 DNALI1O14645 258 aaPredicted RBP2.73□□□□□ -1.97
CLK1-209ENST00000472679 CYB5R3P00387 301 aaPredicted RBP2.73□□□□□ -1.97
CLK1-209ENST00000472679 HPRT1P00492 218 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 IGKV4-1P06312 121 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 UBE2MP61081 183 aaKnown RBP2.73□□□□□ -1.97
CLK1-209ENST00000472679 PPIDQ08752 370 aaKnown RBP2.73□□□□□ -1.97
CLK1-209ENST00000472679 FUT5Q11128 374 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 RCN1Q15293 331 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 YIF1BQ5BJH7 314 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 METAP1DQ6UB28 335 aaPredicted RBP2.73□□□□□ -1.97
CLK1-209ENST00000472679 CTAGE6Q86UF2 777 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 BBS5Q8N3I7 341 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 SLC35G3Q8N808 338 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 OR56A4Q8NGH8 313 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 GHSRQ92847 366 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 MCUR1Q96AQ8 359 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 HAUS1Q96CS2 278 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 ZSCAN16Q9H4T2 348 aaPredicted RBP2.73□□□□□ -1.97
CLK1-209ENST00000472679 CLN6Q9NWW5 311 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 RCL1Q9Y2P8 373 aaKnown RBP2.73□□□□□ -1.97
CLK1-209ENST00000472679 UBIAD1Q9Y5Z9 338 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 INSRP06213 1382 aa2.73□□□□□ -1.97
CLK1-209ENST00000472679 IGHV3OR16-9A0A0B4J2B5 98 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 ZNF98A6NK75 572 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 VGLL3A8MV65 326 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 H7C0C1 242 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 M0R3G1 203 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 ERCC1P07992 297 aaPredicted RBP2.72□□□□□ -1.97
CLK1-209ENST00000472679 ATP5OP48047 213 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 GDI2P50395 445 aaKnown RBP2.72□□□□□ -1.97
CLK1-209ENST00000472679 MERTKQ12866 999 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 SPANXN2Q5MJ10 180 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 LUZP2Q86TE4 346 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 GABRG1Q8N1C3 465 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 OR52E5Q8NH55 327 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 CPNE4Q96A23 557 aaPredicted RBP2.72□□□□□ -1.97
CLK1-209ENST00000472679 WDR34Q96EX3 536 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 BTN2A3PQ96KV6 586 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 IP6K3Q96PC2 410 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 RRAGDQ9NQL2 400 aaPredicted RBP2.72□□□□□ -1.97
CLK1-209ENST00000472679 SCN4AP35499 1836 aa2.72□□□□□ -1.97
CLK1-209ENST00000472679 IGHV1-3A0A0C4DH29 117 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 C16orf90A8MZG2 172 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 PLIN3O60664 434 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 RFC3P40938 356 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 NBL1P41271 181 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 SERPINB8P50452 374 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 IL15RAQ13261 267 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 DMC1Q14565 340 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 HORMAD1Q86X24 394 aa2.71□□□□□ -1.98
CLK1-209ENST00000472679 APCDD1LQ8NCL9 501 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms