RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 BOLLQ8N9W6 283 aaKnown RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 FAM156AQ8NDB6 213 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 EDARADDQ8WWZ3 215 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 APOBEC3DQ96AK3 386 aaPredicted RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 SLCO4A1Q96BD0 722 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 PHF21AQ96BD5 680 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 COG8Q96MW5 612 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 TECTBQ96PL2 329 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 RERGLQ9H628 205 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 NMNAT1Q9HAN9 279 aaPredicted RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 BRD7Q9NPI1 651 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 PNRC2Q9NPJ4 139 aaKnown RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 VSX1Q9NZR4 365 aaPredicted RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 GRHPRQ9UBQ7 328 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 IGHV3OR15-7A0A075B7D8 119 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 IGLV1-36A0A0B4J1U3 117 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 RNASEK-C17orf49H0YIS7 233 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 LGALS8O00214 317 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 DVL1O14640 695 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 ADAM20O43506 726 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 AHCYL1O43865 530 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 KHDRBS3O75525 346 aaKnown RBP7.64□□□□□ -1.19
VCL-204ENST00000472585 PPP1R3DO95685 299 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 GYPAP02724 150 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 LIPFP07098 398 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 ACSM4P0C7M7 580 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 AMY2BP19961 511 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 CA6P23280 308 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 GABRA5P31644 462 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 RPL4P36578 427 aaKnown RBP7.64□□□□□ -1.19
VCL-204ENST00000472585 RGS6P49758 472 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 NPY4RP50391 375 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 SELENOWP63302 87 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 CD69Q07108 199 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 ZBED5Q49AG3 693 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 BEND6Q5SZJ8 279 aaPredicted RBP7.64□□□□□ -1.19
VCL-204ENST00000472585 METTL11BQ5VVY1 283 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 CD276Q5ZPR3 534 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 CFAP77Q6ZQR2 320 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 MBOAT2Q6ZWT7 520 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 VMO1Q7Z5L0 202 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 FAM90A1Q86YD7 464 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 LINC00346Q8IVM7 164 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 C11orf53Q8IXP5 236 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 C1orf87Q8N0U7 546 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 GCSAMQ8N6F7 178 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 Q8N7P7 452 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 CELF2-AS1Q8N7Q2 184 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 LY6G5BQ8NDX9 201 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 OR5L1Q8NGL2 311 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 TSPEARQ8WU66 669 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 C17orf50Q8WW18 174 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 SEH1LQ96EE3 360 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 AJUBAQ96IF1 538 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 TPD52L3Q96J77 140 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 ZNF570Q96NI8 536 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 COQ7Q99807 217 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 MMADHCQ9H3L0 296 aaPredicted RBP7.64□□□□□ -1.19
VCL-204ENST00000472585 RABEP2Q9H5N1 569 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 NRIP3Q9NQ35 241 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 ERVK-18Q9QC07 812 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 RNF7Q9UBF6 113 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 DNAJB11Q9UBS4 358 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 ATPIF1Q9UII2 106 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 RPS6KA6Q9UK32 745 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 FOXJ3Q9UPW0 622 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 SIGLEC7Q9Y286 467 aa7.64□□□□□ -1.19
VCL-204ENST00000472585 CAB39Q9Y376 341 aaPredicted RBP7.64□□□□□ -1.19
VCL-204ENST00000472585 A0A1W2PRD5 423 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 A0A1W2PRF3 423 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 A0A1W2PRM7 423 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 HTR3EA5X5Y0 456 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 F5H5K5 113 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 SOCS2O14508 198 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 PSKH1P11801 424 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 KRR1Q13601 381 aaKnown RBP7.63□□□□□ -1.19
VCL-204ENST00000472585 DOC2BQ14184 412 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 NSUN5P1Q3KNT7 163 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 SNAI3Q3KNW1 292 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 ANKDD1AQ495B1 522 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 LRRC23Q53EV4 343 aaPredicted RBP7.63□□□□□ -1.19
VCL-204ENST00000472585 FOXB2Q5VYV0 432 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 SLC18B1Q6NT16 456 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 WDR86Q86TI4 376 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 RNF113BQ8IZP6 322 aaKnown RBP7.63□□□□□ -1.19
VCL-204ENST00000472585 OFCC1Q8IZS5 231 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 OR6V1Q8N148 313 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 SPERTQ8NA61 448 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 GJC3Q8NFK1 279 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 CFHR4Q92496 578 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 TNFRSF14Q92956 283 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 ERGIC1Q969X5 290 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 TOR3AQ9H497 397 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 PPP1R3EQ9H7J1 279 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 CNTD2Q9H8S5 307 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 FN3KRPQ9HA64 309 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 ZNRD1Q9P1U0 126 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 FBLN5Q9UBX5 448 aa7.63□□□□□ -1.19
VCL-204ENST00000472585 RPUSD1Q9UJJ7 312 aaKnown RBP7.63□□□□□ -1.19
VCL-204ENST00000472585 VPREB3Q9UKI3 123 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms