RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 PGA4P0DJD7 388 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 PGA3P0DJD8 388 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 PGA5P0DJD9 388 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 HTR1DP28221 377 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 KIR3DL2P43630 455 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 UBE2MP61081 183 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 RPS15AP62244 130 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 RPL23P62829 140 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 IRF8Q02556 426 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 SHHQ15465 462 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 LY6EQ16553 131 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 SNRNP35Q16560 246 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 PRSS8Q16651 343 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 GCSAMLQ5JQS6 135 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 AP1ARQ63HQ0 302 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 WDR82Q6UXN9 313 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 NEGR1Q7Z3B1 354 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 HMGN2P46Q86SG4 172 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 SNX31Q8N9S9 440 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 BBOF1Q8ND07 529 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 OR10W1Q8NGF6 305 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 CIRBP-AS1Q8TBR5 109 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 HAUS1Q96CS2 278 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 GPR21Q99679 349 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 SLIRPQ9GZT3 109 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 NCOR1P1Q9H4R4 102 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 WFDC1Q9HC57 220 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 MYOZ1Q9NP98 299 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 C8orf17Q9NRJ1 99 aa2.13□□□□□ -2.07
PTCD3-209ENST00000472044 MRPL22Q9NWU5 206 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 MYEF2Q9P2K5 600 aaKnown RBP2.13□□□□□ -2.07
PTCD3-209ENST00000472044 C2orf16Q68DN1 1984 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 SIGLEC1Q9BZZ2 1709 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 GPR179Q6PRD1 2367 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 IGLV3-12A0A075B6K2 115 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 A0A1W2PQ67 120 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF850A8MQ14 1090 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 GABRPO00591 440 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 CASC3O15234 703 aaKnown RBP2.12□□□□□ -2.07
PTCD3-209ENST00000472044 SLC1A2P43004 574 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 MAGEA1P43355 309 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 TAS2R31P59538 309 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 SPAG1Q07617 926 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 ZNF266Q14584 549 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 RPEL1Q2QD12 228 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 RNASE13Q5GAN3 156 aaKnown RBP2.12□□□□□ -2.07
PTCD3-209ENST00000472044 VKORC1L1Q8N0U8 176 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 RNF182Q8N6D2 247 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 ITFG1Q8TB96 612 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 SLC25A46Q96AG3 418 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 RBBP8Q99708 897 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 RSG1Q9BU20 258 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 GGTLC1Q9BX51 225 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 OSBPL11Q9BXB4 747 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 IQCGQ9H095 443 aaKnown RBP2.12□□□□□ -2.07
PTCD3-209ENST00000472044 TOLLIPQ9H0E2 274 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 CLSTN2Q9H4D0 955 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 SLC38A10Q9HBR0 1119 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 CD209Q9NNX6 404 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 YARS2Q9Y2Z4 477 aaKnown RBP2.12□□□□□ -2.07
PTCD3-209ENST00000472044 S4R3C0 116 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 WDR19Q8NEZ3 1342 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 SCN4AP35499 1836 aa2.12□□□□□ -2.07
PTCD3-209ENST00000472044 PLEKHG2Q9H7P9 1386 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.11□□□□□ -2.07
PTCD3-209ENST00000472044 IGHV3-72A0A0B4J1Y9 119 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 IGHV7-4-1A0A0J9YVY3 117 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 CENPVL3A0A0U1RRI6 287 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 TMEM120BA0PK00 339 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 C5orf63A6NC05 138 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 RPL36A-HNRNPH2H7BZ11 118 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 ZBTB5O15062 677 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 XRCC2O43543 280 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 NMT2O60551 498 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 RAD1O60671 282 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 IGHV3-11P01762 117 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 IL1RNP18510 177 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 RAB5AP20339 215 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 ME2P23368 584 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 MYL9P24844 172 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 LOXP28300 417 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-209ENST00000472044 POLR2IP36954 125 aaKnown RBP2.11□□□□□ -2.07
PTCD3-209ENST00000472044 MYCNOSP40205 109 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 CACNG7P62955 275 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 PPIDQ08752 370 aaKnown RBP2.11□□□□□ -2.07
PTCD3-209ENST00000472044 PNOCQ13519 176 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 KRTAP13-2Q52LG2 175 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 RWDD4Q6NW29 188 aaKnown RBP2.11□□□□□ -2.07
PTCD3-209ENST00000472044 OTUD6AQ7L8S5 288 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 FAM122BQ7Z309 247 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 OSR2Q8N2R0 312 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 TMEM256Q8N2U0 113 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 CSGALNACT2Q8N6G5 542 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 OR5AR1Q8NGP9 310 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 OR9A2Q8NGT5 310 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 OR51F2Q8NH61 342 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 AGR3Q8TD06 166 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 SGTBQ96EQ0 304 aa2.11□□□□□ -2.07
PTCD3-209ENST00000472044 TBL1YQ9BQ87 522 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms