RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ITFG2Q969R8 447 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 RNFT2Q96EX2 444 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 MRPL48Q96GC5 212 aaKnown RBP12.9□□□□□ -0.34
SNX13-205ENST00000471744 PGAM5Q96HS1 289 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 Q96MF0 132 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 RHNO1Q9BSD3 238 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
SNX13-205ENST00000471744 TPK1Q9H3S4 243 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 NOP16Q9Y3C1 178 aaKnown RBP12.9□□□□□ -0.34
SNX13-205ENST00000471744 RPL36Q9Y3U8 105 aaKnown RBP12.9□□□□□ -0.34
SNX13-205ENST00000471744 NDUFS8O00217 210 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 TBX1O43435 398 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 SULT1C4O75897 302 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 KRT8P05787 483 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 SLC2A1P11166 492 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 DDOSTP39656 456 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 CDK5R2Q13319 367 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 SNCBQ16143 134 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 TIGD6Q17RP2 521 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 GLYATL3Q5SZD4 288 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 PLEKHG7Q6ZR37 379 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 DNM1P46Q6ZS02 220 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 USP51Q70EK9 711 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 FAM57BQ71RH2 274 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 PRSS45Q7RTY3 260 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 C8orf59Q8N0T1 100 aaPredicted RBP12.89□□□□□ -0.35
SNX13-205ENST00000471744 ZCCHC24Q8N2G6 241 aaKnown RBP12.89□□□□□ -0.35
SNX13-205ENST00000471744 OR8G5Q8NG78 346 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 OR13G1Q8NGZ3 307 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 UBASH3BQ8TF42 649 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 FAM168AQ92567 244 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 SPSB4Q96A44 273 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 EGLN1Q9GZT9 426 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 SLC22A4Q9H015 551 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 MOB1AQ9H8S9 216 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 DECR2Q9NUI1 292 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 EXOGQ9Y2C4 368 aaKnown RBP12.89□□□□□ -0.35
SNX13-205ENST00000471744 N6AMT1Q9Y5N5 214 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 OTOGQ6ZRI0 2925 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 ACANP16112 2415 aa12.89□□□□□ -0.35
SNX13-205ENST00000471744 FLNAP21333 2647 aaKnown RBP12.89□□□□□ -0.35
SNX13-205ENST00000471744 TMEM269A0A1B0GVZ9 245 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 LOC390937A0A1W2PQ73 354 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 A0A1W2PQL4 384 aaPredicted RBP12.88□□□□□ -0.35
SNX13-205ENST00000471744 IRGMA1A4Y4 181 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 GGT3PA6NGU5 568 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 ATP6V1G2O95670 118 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
SNX13-205ENST00000471744 CD55P08174 381 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 DBTP11182 482 aaKnown RBP12.88□□□□□ -0.35
SNX13-205ENST00000471744 DAOP14920 347 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 MMP16P51512 607 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 ZNF92Q03936 586 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 ZNF91Q05481 1191 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 RAB40BQ12829 278 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 KLHL22Q53GT1 634 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 TMEM255AQ5JRV8 349 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 EGFL6Q8IUX8 553 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 ACBD7Q8N6N7 88 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 ZNF525Q8N782 197 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 SPRYD4Q8WW59 207 aaPredicted RBP12.88□□□□□ -0.35
SNX13-205ENST00000471744 NRG4Q8WWG1 115 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 TBX5Q99593 518 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 BRD7Q9NPI1 651 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 INPP5EQ9NRR6 644 aa12.88□□□□□ -0.35
SNX13-205ENST00000471744 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
SNX13-205ENST00000471744 TANC2Q9HCD6 1990 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 A0A0U1RQV5 110 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 DAPL1A0PJW8 107 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 METTL15A6NJ78 407 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 ZSCAN5BA6NJL1 495 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 CD300LBA8K4G0 201 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 PSMD9O00233 223 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 TPD52L2O43399 206 aaKnown RBP12.87□□□□□ -0.35
SNX13-205ENST00000471744 SPRY3O43610 288 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 WBP4O75554 376 aaKnown RBP12.87□□□□□ -0.35
SNX13-205ENST00000471744 APOL3O95236 402 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 IGHV1-46P01743 117 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 SLC25A16P16260 332 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 HSPA13P48723 471 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 ISL1P61371 349 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 FAM220AQ7Z4H9 259 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 KCTD20Q7Z5Y7 419 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 OR5AS1Q8N127 324 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 RFLNBQ8N5W9 214 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 YIPF7Q8N8F6 280 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 OR2AE1Q8NHA4 323 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 APH1BQ8WW43 257 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 TFAP2CQ92754 450 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 RDH5Q92781 318 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 LGALS12Q96DT0 336 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 REEP6Q96HR9 211 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 SLC30A2Q9BRI3 323 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 PIMREGQ9BSJ6 248 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 SAP30LQ9HAJ7 183 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 MSL2Q9HCI7 577 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 DLL4Q9NR61 685 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms