RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 USP43Q70EL4 1123 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 PGAP1Q75T13 922 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 MRPL21Q7Z2W9 205 aaKnown RBP12.85□□□□□ -0.35
COL1A1-203ENST00000471344 TMEM179BQ7Z7N9 219 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 BCL6BQ8N143 479 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-203ENST00000471344 BPIFB2Q8N4F0 458 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 ZDHHC22Q8N966 263 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 OR6K6Q8NGW6 343 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 DGCR6LQ9BY27 220 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 REEP1Q9H902 201 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 KCNG2Q9UJ96 466 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 PRPF19Q9UMS4 504 aaKnown RBP12.85□□□□□ -0.35
COL1A1-203ENST00000471344 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
COL1A1-203ENST00000471344 SOX21Q9Y651 276 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-203ENST00000471344 IGHV3OR16-10A0A075B7F0 116 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 FAM183AA6NL82 134 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 CD300LBA8K4G0 201 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ACOT8O14734 319 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 FAM20BO75063 409 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ENTPD1P49961 510 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 RAD23AP54725 363 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 MALLQ13021 153 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF404Q494X3 552 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 FAM98BQ52LJ0 330 aaKnown RBP12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ARMCX4Q5H9R4 360 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 LINC01590Q5TEZ4 76 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 KLBQ86Z14 1044 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ADGRG5Q8IZF4 528 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 MUC20Q8N307 709 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-203ENST00000471344 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 SIGLECL1Q8N7X8 197 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 OR2T33Q8NG76 320 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 OR10G2Q8NGC3 310 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ZFAND2BQ8WV99 257 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-203ENST00000471344 SPTSSAQ969W0 71 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 SLAMF6Q96DU3 332 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 DUX5Q96PT3 197 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 COPS4Q9BT78 406 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 SUCNR1Q9BXA5 334 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 CADM1Q9BY67 442 aaKnown RBP12.84□□□□□ -0.35
COL1A1-203ENST00000471344 CENPMQ9NSP4 180 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF69Q9UC07 566 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 PPIAL4AQ9Y536 164 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 AUP1Q9Y679 476 aa12.84□□□□□ -0.35
COL1A1-203ENST00000471344 ZNF593O00488 134 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-203ENST00000471344 CFPP27918 469 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 CD80P33681 288 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 CD200P41217 278 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 GATA4P43694 442 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 SLC25A1P53007 311 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 OR8G1Q15617 311 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 PCK2Q16822 640 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF181Q2M3W8 571 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-203ENST00000471344 ASB9Q96DX5 294 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF48Q96MX3 618 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-203ENST00000471344 AMELYQ99218 206 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 FEVQ99581 238 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 ADAT1Q9BUB4 502 aaKnown RBP12.83□□□□□ -0.36
COL1A1-203ENST00000471344 SSBP3Q9BWW4 388 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-203ENST00000471344 OR5V1Q9UGF6 321 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 LRCH1Q9Y2L9 728 aa12.83□□□□□ -0.36
COL1A1-203ENST00000471344 DHRS12A0PJE2 317 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 IFNL4K9M1U5 179 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 GYG2O15488 501 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 RAP2AP10114 183 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 FMO3P31513 532 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 TUSC1Q2TAM9 212 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 DRAM2Q6UX65 266 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 HS3ST5Q8IZT8 346 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 OR56B2PQ8NGI1 322 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 Q8TCH9 128 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 FAM216AQ8WUB2 273 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 C1orf147Q96MC9 270 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-203ENST00000471344 CHID1Q9BWS9 393 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 PPP1R3EQ9H7J1 279 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
COL1A1-203ENST00000471344 IGHV2-70DA0A0C4DH43 119 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 GGT3PA6NGU5 568 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 LRRC30A6NM36 301 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 RIIAD1A6NNX1 92 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 TRIM77I1YAP6 450 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 CST1P01037 141 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 PITPNBP48739 271 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 GNB2P62879 340 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
COL1A1-203ENST00000471344 CBX1P83916 185 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 PAX8Q06710 450 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 EIF2B1Q14232 305 aaKnown RBP12.81□□□□□ -0.36
COL1A1-203ENST00000471344 SFRP4Q6FHJ7 346 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF826PQ6ZT77 177 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 DPY19L4Q7Z388 723 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 ERI1Q8IV48 349 aaKnown RBP12.81□□□□□ -0.36
COL1A1-203ENST00000471344 BOLLQ8N9W6 283 aaKnown RBP12.81□□□□□ -0.36
COL1A1-203ENST00000471344 OR6N2Q8NGY6 317 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 CANT1Q8WVQ1 401 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms