RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MYEF2Q9P2K5 600 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 OR52A1Q9UKL2 312 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ERGIC3Q9Y282 383 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 IGLV3-9A0A075B6K5 115 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 A0A0U1RQV5 110 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 A6NHS1 94 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 TMCC2O75069 709 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 KRT8P05787 483 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 COL8A1P27658 744 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 TGFBR1P36897 503 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 RBMXP38159 391 aaKnown RBP8.48□□□□□ -1.05
SF3A1-207ENST00000471342 ACTA2P62736 377 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 ACTG2P63267 376 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 GALK2Q01415 458 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 GK2Q14410 553 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-207ENST00000471342 HLXQ14774 488 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-207ENST00000471342 OR8B8Q15620 311 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 NEDD8Q15843 81 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 CTF1Q16619 201 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 TSTQ16762 297 aaKnown RBP8.48□□□□□ -1.05
SF3A1-207ENST00000471342 TIGD6Q17RP2 521 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 CEP78Q5JTW2 689 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 FAM27D1Q5T7N8 215 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 LIPKQ5VXJ0 399 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 TMEM53Q6P2H8 277 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 FBXW12Q6X9E4 464 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 Q6ZR03 302 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 FAM57BQ71RH2 274 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 WFDC8Q8IUA0 241 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 YIPF7Q8N8F6 280 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 OR51E1Q8TCB6 317 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 GTF3AQ92664 365 aaKnown RBP8.48□□□□□ -1.05
SF3A1-207ENST00000471342 ADAT3Q96EY9 351 aaPredicted RBP8.48□□□□□ -1.05
SF3A1-207ENST00000471342 CCDC90BQ9GZT6 254 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 RNF167Q9H6Y7 350 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 NDUFB11Q9NX14 153 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 IKZF2Q9UKS7 526 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 CEPT1Q9Y6K0 416 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 FASNP49327 2511 aaKnown RBP8.48□□□□□ -1.05
SF3A1-207ENST00000471342 CSMD2Q7Z408 3487 aa8.48□□□□□ -1.05
SF3A1-207ENST00000471342 IGKV1-9A0A0C4DH69 117 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 LOC390937A0A1W2PQ73 354 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 TUBAL3A6NHL2 446 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 H3BSA7 217 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 M0R1B8 84 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 P2RY10O00398 339 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 CLPTM1O96005 669 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 CD8AP01732 235 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 FAM157BP0CG42 384 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF250P15622 560 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 IGFBP3P17936 291 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-207ENST00000471342 ADRA2CP18825 462 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 MYL12AP19105 171 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 CD53P19397 219 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 CELP19835 753 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 PTAFRP25105 342 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 THBS4P35443 961 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 GUCA1AP43080 201 aaPredicted RBP8.47□□□□□ -1.05
SF3A1-207ENST00000471342 CAPZA2P47755 286 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 GDI2P50395 445 aaKnown RBP8.47□□□□□ -1.05
SF3A1-207ENST00000471342 MMP15P51511 669 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 PSG7Q13046 419 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 HNRNPA0Q13151 305 aaKnown RBP8.47□□□□□ -1.05
SF3A1-207ENST00000471342 MED22Q15528 200 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 ADIPOQQ15848 244 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 SPRNQ5BIV9 151 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 HIST2H2BCQ6DN03 193 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 ADAM5Q6NVV9 412 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 TMPRSS11AQ6ZMR5 421 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 SATL1Q86VE3 508 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 NUP37Q8NFH4 326 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 KBTBD8Q8NFY9 601 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 ABHD4Q8TB40 342 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 SLC25A40Q8TBP6 338 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
SF3A1-207ENST00000471342 HAVCR1Q96D42 359 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 PLPPR2Q96GM1 343 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 OR51E2Q9H255 320 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 POLR1DQ9Y2S0 133 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 SNX5Q9Y5X3 404 aa8.47□□□□□ -1.05
SF3A1-207ENST00000471342 ABCA4P78363 2273 aa8.46□□□□□ -1.05
SF3A1-207ENST00000471342 ICE1Q9Y2F5 2266 aa8.46□□□□□ -1.05
SF3A1-207ENST00000471342 ROS1P08922 2347 aa8.46□□□□□ -1.05
SF3A1-207ENST00000471342 GCN1Q92616 2671 aaKnown RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 TRAV8-7A0A075B6U6 113 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 A0A0G2JK05 382 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 PNMA8CA0A1B0GUJ8 204 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 DPPA5A6NC42 116 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 ANKRD61A6NGH8 418 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 LOC110117498-PIK3R3F6TDL0 507 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 J3QW42 95 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 DANCRP0C864 163 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 KITLGP21583 273 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 PAX7P23759 505 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 GADD45AP24522 165 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 GLRXP35754 106 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 RPL5P46777 297 aaKnown RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 GBX2P52951 348 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-207ENST00000471342 NR1H2P55055 460 aa8.46□□□□□ -1.06
SF3A1-207ENST00000471342 TPTEP56180 551 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms