RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CASP3P42574 277 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 MAGEA5P43359 124 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 CYB561P49447 251 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 STARP49675 285 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TNFSF10P50591 281 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 HLCSP50747 726 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF136P52737 540 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 FOXF1Q12946 379 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 SKP2Q13309 424 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 KIAA0141Q14154 515 aaPredicted RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 IQCCQ4KMZ1 466 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF311Q5JNZ3 666 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 SAMD4BQ5PRF9 694 aaKnown RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 AGAP7PQ5VUJ5 663 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 C1orf146Q5VVC0 180 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 FAM166AQ6J272 317 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 REEP3Q6NUK4 255 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TBPL2Q6SJ96 375 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 ISLR2Q6UXK2 745 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 LRRC74BQ6ZQY2 392 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 Q6ZR54 194 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 GPR141Q7Z602 305 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 SPATA24Q86W54 205 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 CARM1Q86X55 608 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 FAM219AQ8IW50 185 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 CADM2Q8N3J6 435 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 RPRMLQ8N4K4 120 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TMEM251Q8N6I4 163 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TMCO5AQ8N6Q1 288 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TRIML2Q8N7C3 387 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 OR2M7Q8NG81 312 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 OR2M3Q8NG83 312 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 OR52J3Q8NH60 311 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 GPR119Q8TDV5 335 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 RNF138Q8WVD3 245 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 CANT1Q8WVQ1 401 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 MCUR1Q96AQ8 359 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 NTNG2Q96CW9 530 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 LURAP1Q96LR2 239 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF597Q96LX8 424 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 FER1L6-AS2Q96M78 137 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TRNT1Q96Q11 434 aaKnown RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 STACQ99469 402 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 ARHGDIGQ99819 225 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 HOPXQ9BPY8 73 aaPredicted RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 UTP23Q9BRU9 249 aaKnown RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 PELOQ9BRX2 385 aaKnown RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 OSBPL11Q9BXB4 747 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 OR11A1Q9GZK7 315 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 DEFB127Q9H1M4 99 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 TMEM38AQ9H6F2 299 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 METTL7AQ9H8H3 244 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 HPF1Q9NWY4 346 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 KLRF1Q9NZS2 232 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 SPRR3Q9UBC9 169 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 KLK11Q9UBX7 282 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 AURKCQ9UQB9 309 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 YARS2Q9Y2Z4 477 aaKnown RBP3.22□□□□□ -1.89
COL9A1-206ENST00000470652 SH3GLB1Q9Y371 365 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 PCNX1Q96RV3 2341 aa3.22□□□□□ -1.89
COL9A1-206ENST00000470652 IGKV1D-42A0A075B6H8 117 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 IGHV3-15A0A0B4J1V0 119 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 TCRBV3S1A0A5B6 114 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 TMEM72A0PK05 275 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 OR6C70A6NIJ9 312 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 NPIPA5E9PKD4 350 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 NPIPA3F8WFD2 350 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 M0R129 80 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 PDLIM1O00151 329 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 IMPA2O14732 288 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 NME2P1O60361 137 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 RAMP1O60894 148 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 TRIM3O75382 744 aaPredicted RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 TRAPPC6AO75865 159 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 BCAS2O75934 225 aaPredicted RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 CSTAP01040 98 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 ATP6V1C1P21283 382 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 TBXA2RP21731 343 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 PTAFRP25105 342 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 GIFP27352 417 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 HTR1EP28566 365 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 ACAA2P42765 397 aaKnown RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 UQCRFS1P47985 274 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 IDH2P48735 452 aaKnown RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 SUCLG1P53597 346 aaKnown RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 CRISP3P54108 245 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 UGT2B15P54855 530 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 ELF3P78545 371 aaPredicted RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 HPCAP84074 193 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 FADDQ13158 208 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 TNK1Q13470 666 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 FLOT2Q14254 428 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 QPRTQ15274 297 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 ZNHIT3Q15649 155 aaPredicted RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF141Q15928 474 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 ZNF630Q2M218 657 aaPredicted RBP3.21□□□□□ -1.9
COL9A1-206ENST00000470652 C15orf32Q32M92 178 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 DNAL1Q4LDG9 190 aa3.21□□□□□ -1.9
COL9A1-206ENST00000470652 ATAD3BQ5T9A4 648 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms