RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 DVL2O14641 736 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 SGCEO43556 437 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 GATBO75879 557 aaKnown RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 TNFSF13O75888 250 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 WISP2O76076 250 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ABHD16AO95870 558 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 GPANK1O95872 356 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 IGHV3-9P01782 118 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 DBHP09172 617 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 UBCP0CG48 685 aaKnown RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 GLI4P10075 376 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 COX5BP10606 129 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 B4GALT1P15291 398 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 COX5AP20674 150 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 GADD45AP24522 165 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 MAPK3P27361 379 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 CFPP27918 469 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 FGF9P31371 208 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 TGFBR2P37173 567 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 OPRL1P41146 370 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 GDI2P50395 445 aaKnown RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 GTF2A1P52655 376 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 HCCSP53701 268 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 UBE2NP61088 152 aaKnown RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 TUBA1BP68363 451 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 PLP2Q04941 152 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ALKBH1Q13686 389 aaKnown RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 SSX1Q16384 188 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 YIF1BQ5BJH7 314 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ELFN2Q5R3F8 820 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 DMKNQ6E0U4 476 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 RTL6Q6ICC9 239 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 MTFR2Q6P444 385 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 CD200R1LQ6Q8B3 271 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 CORO6Q6QEF8 472 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ARL9Q6T311 187 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 DRAM2Q6UX65 266 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 LRRN1Q6UXK5 716 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ZNF704Q6ZNC4 412 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 TUBA1AQ71U36 451 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 DOLPP1Q86YN1 238 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 LINC00346Q8IVM7 164 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 GCNT2Q8N0V5 402 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 LRRC18Q8N456 261 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 RFLNBQ8N5W9 214 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ZNF676Q8N7Q3 588 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 CCDC54Q8NEL0 328 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 OR1K1Q8NGR3 316 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 OR2G2Q8NGZ5 317 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 OR5AK2Q8NH90 309 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 RPS4Y2Q8TD47 263 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 SMAP2Q8WU79 429 aaPredicted RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 RND1Q92730 232 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 KCNJ15Q99712 375 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ATF6BQ99941 703 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 VKORC1Q9BQB6 163 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 SLCO1C1Q9NYB5 712 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 PLEK2Q9NYT0 353 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ST6GALNAC2Q9UJ37 374 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 ZNF391Q9UJN7 358 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 KLHDC2Q9Y2U9 406 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 LRP12Q9Y561 859 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 R4GMQ9 66 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 SPG11Q96JI7 2443 aa5.79□□□□□ -1.48
VAMP3-202ENST00000470357 DIDO1Q9BTC0 2240 aaKnown RBP5.79□□□□□ -1.48
VAMP3-202ENST00000470357 MED13LQ71F56 2210 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 LOC100506127A0A0U1RQW1 187 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 IQCMA0A1B0GVH7 501 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 TMEM269A0A1B0GVZ9 245 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 ZNF879B4DU55 563 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 H3BMQ9 156 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 RER1O15258 196 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 DOK2O60496 412 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 ARL6IP5O75915 188 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 RPP14O95059 124 aaKnown RBP5.78□□□□□ -1.48
VAMP3-202ENST00000470357 LALBAP00709 142 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 CD2P06729 351 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 ITGA5P08648 1049 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 ZNF12P17014 697 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 MYL9P24844 172 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 UGT2B10P36537 528 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 CD79BP40259 229 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 RPS27P42677 84 aaKnown RBP5.78□□□□□ -1.48
VAMP3-202ENST00000470357 CA7P43166 264 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 RANBP1P43487 201 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 SERPINB10P48595 397 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 TPTEP56180 551 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 SLC3A1Q07837 685 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 DBPQ10586 325 aaPredicted RBP5.78□□□□□ -1.48
VAMP3-202ENST00000470357 CTF1Q16619 201 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 BCL2L15Q5TBC7 163 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 TMEM244Q5VVB8 128 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 SP5Q6BEB4 398 aaPredicted RBP5.78□□□□□ -1.48
VAMP3-202ENST00000470357 PLXDC2Q6UX71 529 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 UNQ6126/PRO20091Q6UXV3 157 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 CFAP77Q6ZQR2 320 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 SLC16A12Q6ZSM3 486 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 SEM1Q6ZVN7 128 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 USP43Q70EL4 1123 aa5.78□□□□□ -1.48
VAMP3-202ENST00000470357 LINGO2Q7L985 606 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms