RNA–Protein interactions for RNA: ENST00000470038.1

SNAP47-206, Transcript of synaptosome associated protein 47, human

TSL 3

Gene SNAP47, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP47-206	ENST00000470038	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.44	□□□□□ -0.26
SNAP47-206	ENST00000470038	FN3KRP	Q9HA64	309 aa		13.44	□□□□□ -0.26
SNAP47-206	ENST00000470038	EFCAB1	Q9HAE3	211 aa		13.44	□□□□□ -0.26
SNAP47-206	ENST00000470038	C1RL	Q9NZP8	487 aa		13.44	□□□□□ -0.26
SNAP47-206	ENST00000470038	RNF7	Q9UBF6	113 aa		13.44	□□□□□ -0.26
SNAP47-206	ENST00000470038	CTSZ	Q9UBR2	303 aa		13.44	□□□□□ -0.26
SNAP47-206	ENST00000470038	CLPSL1	A2RUU4	121 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	C3orf80	F5H4A9	247 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	LGALS8	O00214	317 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	ADAM20	O43506	726 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	LIPF	P07098	398 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	MELTF	P08582	738 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	NOS3	P29474	1203 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	GGT2	P36268	569 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	NUDT2	P50583	147 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	TPTE	P56180	551 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	RELB	Q01201	579 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	RFX4	Q33E94	735 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	TMEM86B	Q8N661	226 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	GATAD2B	Q8WXI9	593 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	IFT27	Q9BW83	186 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	SLC22A4	Q9H015	551 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	NSRP1	Q9H0G5	558 aa	Known RBP	13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	OR52D1	Q9H346	318 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	FN3K	Q9H479	309 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	CYB5R1	Q9UHQ9	305 aa		13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	NOP16	Q9Y3C1	178 aa	Known RBP	13.43	□□□□□ -0.26
SNAP47-206	ENST00000470038	CENPVL3	A0A0U1RRI6	287 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	CD300LB	A8K4G0	201 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038		M0R135	149 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	TNFRSF13B	O14836	293 aa	Predicted RBP	13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	ARPC3	O15145	178 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	NDUFA7	O95182	113 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	METTL11B	Q5VVY1	283 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	GLYAT	Q6IB77	296 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	ZNF620	Q6ZNG0	422 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	ZBTB46	Q86UZ6	589 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	PNLDC1	Q8NA58	520 aa	Known RBP	13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	SDR9C7	Q8NEX9	313 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	SSMEM1	Q8WWF3	244 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	SPTSSA	Q969W0	71 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	ZNF799	Q96GE5	643 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	C7orf34	Q96L11	122 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	WDFY2	Q96P53	400 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	TBX15	Q96SF7	602 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	ADAT1	Q9BUB4	502 aa	Known RBP	13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	RASSF4	Q9H2L5	321 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	PNRC2	Q9NPJ4	139 aa	Known RBP	13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	ACOXL	Q9NUZ1	547 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	SAMD4A	Q9UPU9	718 aa	Known RBP	13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	POMT1	Q9Y6A1	747 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038		V9GYQ6	96 aa		13.42	□□□□□ -0.26
SNAP47-206	ENST00000470038	TRAV38-1	A0A0B4J264	116 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	OR6C68	A6NDL8	312 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	GGT3P	A6NGU5	568 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038		M0QZ24	198 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	GMDS	O60547	372 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	CCDC22	O60826	627 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	GMNN	O75496	209 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	MMP9	P14780	707 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	ZNF823	P16415	610 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	SMIM11A	P58511	58 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	OCLN	Q16625	522 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	HACD2	Q6Y1H2	254 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	FAM86B1	Q8N7N1	296 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	TBC1D15	Q8TC07	691 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	LHX4	Q969G2	390 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	DHRS1	Q96LJ7	313 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	CITED1	Q99966	193 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	FUZ	Q9BT04	418 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	TRIM15	Q9C019	465 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	DCAF13	Q9NV06	445 aa	Known RBP	13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	C1orf123	Q9NWV4	160 aa		13.41	□□□□□ -0.26
SNAP47-206	ENST00000470038	OOEP	A6NGQ2	149 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038		A6NLC8	198 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	TIMM23	O14925	209 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	NDUFA2	O43678	99 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	OR10H3	O60404	316 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	GADD45G	O95257	159 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	GYPA	P02724	150 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	GRP	P07492	148 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	PSME3	P61289	254 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	ARF6	P62330	175 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	SPIB	Q01892	262 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	ZNF92	Q03936	586 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	PDCD1	Q15116	288 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	SNAI3	Q3KNW1	292 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	SLC35F1	Q5T1Q4	408 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	LNX2	Q8N448	690 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	SCCPDH	Q8NBX0	429 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	OR2AE1	Q8NHA4	323 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	MAP6	Q96JE9	813 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	SMURF1	Q9HCE7	757 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	TRIM36	Q9NQ86	728 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	MRPL22	Q9NWU5	206 aa	Known RBP	13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	ABCD2	Q9UBJ2	740 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	RNF114	Q9Y508	228 aa		13.4	□□□□□ -0.26
SNAP47-206	ENST00000470038	IGHV1-69D	A0A0B4J2H0	117 aa		13.39	□□□□□ -0.27
SNAP47-206	ENST00000470038	hCG_1807616	A0A1W2PRN6	198 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms