RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 PGAP1Q75T13 922 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 SPATC1Q76KD6 591 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 MRPL21Q7Z2W9 205 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 KLBQ86Z14 1044 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 YIPF7Q8N8F6 280 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 OR52I1Q8NGK6 324 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 NEU4Q8WWR8 484 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 CMBLQ96DG6 245 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 PGAM5Q96HS1 289 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 FOXC2Q99958 501 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 YTHDF1Q9BYJ9 559 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 MRPL37Q9BZE1 423 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 GSX2Q9BZM3 304 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 AASSQ9UDR5 926 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 NUFIP1Q9UHK0 495 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 MRM2Q9UI43 246 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 PCDHGB5Q9Y5G0 923 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 TACC2O95359 2948 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 ITPR2Q14571 2701 aa10.83□□□□□ -0.68
SPTLC1-204ENST00000469778 LOC390937A0A1W2PQ73 354 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 LOC110117498-PIK3R3F6TDL0 507 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 MTRF1O75570 445 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 ADH4P08319 380 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 CCR9P51686 369 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 ST3GAL4Q11206 333 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 PSG7Q13046 419 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 GK2Q14410 553 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 TIGD6Q17RP2 521 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 NKPD1Q17RQ9 610 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 DEFB113Q30KQ7 82 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 CCDC58Q4VC31 144 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 PRSS57Q6UWY2 283 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 NAA40Q86UY6 237 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 STX19Q8N4C7 294 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 ZNF540Q8NDQ6 660 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 CSNK2A3Q8NEV1 391 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 BPIFB6Q8NFQ5 453 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 GGHQ92820 318 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 SGK3Q96BR1 496 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 TBX5Q99593 518 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 OR51B6Q9H340 312 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 DUSP21Q9H596 190 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 DYNLRB1Q9NP97 96 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 FKBP14Q9NWM8 211 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 FAM206AQ9NX38 181 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 PURGQ9UJV8 347 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 MYRFQ9Y2G1 1151 aa10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 CAB39Q9Y376 341 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 RAI1Q7Z5J4 1906 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-204ENST00000469778 FBN2P35556 2912 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 NOTCH2Q04721 2471 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 NAV2Q8IVL1 2488 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 DHRS7CA6NNS2 312 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 IQCF6A8MYZ5 107 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 MRPS14O60783 128 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 SRSF10O75494 262 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 APOL3O95236 402 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 ZNF12P17014 697 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 EFNA4P52798 201 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 GBX2P52951 348 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 MRPS11P82912 194 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 MZT1Q08AG7 82 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 ZBTB37Q5TC79 503 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 LAIR2Q6ISS4 152 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 FAM57BQ71RH2 274 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 KRT74Q7RTS7 529 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 LHFPL3Q86UP9 236 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 ELMOD2Q8IZ81 293 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 OR52N1Q8NH53 320 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 SPRYD4Q8WW59 207 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 SIGLEC11Q96RL6 698 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 SYT3Q9BQG1 590 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 ALG8Q9BVK2 526 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 CDCA4Q9BXL8 241 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 PBOV1Q9GZY1 135 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 LIME1Q9H400 295 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 ABCB9Q9NP78 766 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 MYOZ1Q9NP98 299 aaPredicted RBP10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 PTTG3PQ9NZH4 202 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 MRPL15Q9P015 296 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 TAAR3PQ9P1P4 343 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 GNG8Q9UK08 70 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 PLEKHA6Q9Y2H5 1048 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 LRRC42Q9Y546 428 aa10.81□□□□□ -0.68
SPTLC1-204ENST00000469778 DSCAMO60469 2012 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 A0A1B0GWJ7 208 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 GGT3PA6NGU5 568 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 C17orf100A8MU93 164 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 TBX1O43435 398 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 TIMM8AO60220 97 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 ISG15P05161 165 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 LIMS3P0CW19 117 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 LIMS4P0CW20 117 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 SLC2A1P11166 492 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 TNFSF4P23510 183 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 TGM4P49221 684 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 MMP15P51511 669 aa10.8□□□□□ -0.68
SPTLC1-204ENST00000469778 DSCR9P59020 149 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms