RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SSX2Q16385 188 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 ZNF239Q16600 458 aaKnown RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 OR10D4PQ8NGN7 298 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 CD300LFQ8TDQ1 290 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RNF128Q8TEB7 428 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 COX14Q96I36 57 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 CD207Q9UJ71 328 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 FBXO7Q9Y3I1 522 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RFNGQ9Y644 331 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 SVILO95425 2214 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 C11orf98E9PRG8 122 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 MOSPD3O75425 235 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 HNRNPA1P09651 372 aaKnown RBP eCLIP7.11□□□□□ -1.27
TPM3-215ENST00000469717 PVRP15151 417 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 GLP1RP43220 463 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RIDAP52758 137 aaKnown RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 STARD6P59095 220 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 PSG6Q00889 435 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 ZNF616Q08AN1 781 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 KIAA0141Q14154 515 aaPredicted RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 BTNL8Q6UX41 500 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 SPNS3Q6ZMD2 512 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 EXD3Q8N9H8 876 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 APCDD1LQ8NCL9 501 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 MAFIPQ8WZ33 124 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 HLA-CQ95604 372 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 SLC22A18Q96BI1 424 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 SLC25A44Q96H78 314 aaPredicted RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 INTS14Q96SY0 518 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 NUDT9Q9BW91 350 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 SLC5A7Q9GZV3 580 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 SLC2A8Q9NY64 477 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RCL1Q9Y2P8 373 aaKnown RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 OTOL1A6NHN0 477 aaPredicted RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 TMEM212A6NML5 194 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 MFNGO00587 321 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 MPZL1O95297 269 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 MAOAP21397 527 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 P2RY2P41231 377 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RPS10P46783 165 aaKnown RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 SURF2Q15527 256 aaPredicted RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 ANKRD55Q3KP44 614 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 DOCK8Q8NF50 2099 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 ASB17Q8WXJ9 295 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 ASB13Q8WXK3 278 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 TMEM230Q96A57 120 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RAB3CQ96E17 227 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RGCCQ9H4X1 137 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 PDE7BQ9NP56 450 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 DAPP1Q9UN19 280 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 TCRBV21S2A2A0A5A6 115 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RHPN2P1A8MT19 583 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 NPIPB9F8W1W9 429 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 TERTO14746 1132 aaKnown RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 CTSBP07858 339 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 CEBPGP53567 150 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 SPEM2Q0P670 501 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 MIDNQ504T8 468 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 ALG10Q5BKT4 473 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 C1QL3Q5VWW1 255 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 LCN10Q6JVE6 187 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 ULK3Q6PHR2 472 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 LINC00114Q6XXX2 140 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 CDRT4Q8N9R6 151 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 ASB5Q8WWX0 329 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 TCEAL7Q9BRU2 100 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 NICN1Q9BSH3 213 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 EIF5A2Q9GZV4 153 aaKnown RBP7.11□□□□□ -1.27
TPM3-215ENST00000469717 ZDHHC8Q9ULC8 765 aa7.11□□□□□ -1.27
TPM3-215ENST00000469717 RAB27BO00194 218 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 DUS4LO95620 317 aaKnown RBP7.1□□□□□ -1.27
TPM3-215ENST00000469717 SFTPBP07988 381 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 SPARCP09486 303 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 DPTQ07507 201 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 PRICKLE4Q2TBC4 344 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 SLC35D3Q5M8T2 416 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 FBXO42Q6P3S6 717 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 CBLN3Q6UW01 205 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 TAF8Q7Z7C8 310 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 RAB42Q8N4Z0 105 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 TSPAN32Q96QS1 320 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 LPAR4Q99677 370 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 SLC17A9Q9BYT1 436 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 DUSP22Q9NRW4 184 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 SERGEFQ9UGK8 458 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 DHDHQ9UQ10 334 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 RP1P56715 2156 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 ARPC3O15145 178 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 ZNF432O94892 652 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 AK1P00568 194 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 HLA-GP17693 338 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 TACR3P29371 465 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 ACTR1BP42025 376 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 SPCS3P61009 180 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 NAAAQ02083 359 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 MGAT2Q10469 447 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 GPR18Q14330 331 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 CLEC18BQ6UXF7 455 aa7.1□□□□□ -1.27
TPM3-215ENST00000469717 ERN2Q76MJ5 926 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms