RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 IGLV1-36A0A0B4J1U3 117 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 IGHV3-66A0A0C4DH42 116 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 A0A1B0GW55 424 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 LYRM9A8MSI8 78 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 ANKRD63C9JTQ0 380 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 INS-IGF2F8WCM5 200 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 SMKR1H3BMG3 65 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 CASQ2O14958 399 aaPredicted RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 ANGPTL7O43827 346 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 DUX4L2P0CJ85 424 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 DUX4L3P0CJ86 424 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 DUX4L5P0CJ88 424 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 DUX4L6P0CJ89 424 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 DUX4L7P0CJ90 424 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 CCNB1P14635 433 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 CEACAM6P40199 344 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 SP4Q02446 784 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 ITIH4Q14624 930 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 TRAM2Q15035 370 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 PGGHGQ32M88 737 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 TWF2Q6IBS0 349 aaKnown RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 OR52W1Q6IF63 320 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 OTUD6BQ8N6M0 293 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 BPIFCQ8NFQ6 507 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 ZNF75CPQ92670 426 aaPredicted RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 COL21A1Q96P44 957 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 GSDMAQ96QA5 445 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 XPO6Q96QU8 1125 aaKnown RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 SLC17A9Q9BYT1 436 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 ACTR3CQ9C0K3 210 aaPredicted RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 IFI27L2Q9H2X8 130 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 LHX9Q9NQ69 397 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 DUX4Q9UBX2 424 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 TBX21Q9UL17 535 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 TBC1D24Q9ULP9 559 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 CAB39Q9Y376 341 aaPredicted RBP3.18□□□□□ -1.9
LSM5-209ENST00000468872 KCNE3Q9Y6H6 103 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 NAIPQ13075 1403 aa3.18□□□□□ -1.9
LSM5-209ENST00000468872 AKAP11Q9UKA4 1901 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 CCDC141Q6ZP82 1450 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 TOGARAM1Q9Y4F4 1720 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 IGLV4-69A0A075B6H9 119 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 IGHV3-74A0A0B4J1X5 117 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 KBTBD11-OT1A0A1B0GTJ5 212 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 K7EMT4 169 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 ZNF823P16415 610 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 GSTM3P21266 225 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 OR1E1P30953 314 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 RPS5P46782 204 aaKnown RBP3.17□□□□□ -1.9
LSM5-209ENST00000468872 PPOXP50336 477 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 TCP10Q12799 353 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 XKR4Q5GH76 650 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 TTC23LQ6PF05 361 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 TIFABQ6ZNK6 161 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 FAM92BQ6ZTR7 304 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 FAM86B1Q8N7N1 296 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 C15orf56Q8N910 161 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 OR9G4Q8NGQ1 327 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 OR5K2Q8NHB8 316 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 EEF1AKMT3Q96AZ1 226 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 EXOSC8Q96B26 276 aaKnown RBP3.17□□□□□ -1.9
LSM5-209ENST00000468872 DNAJC1Q96KC8 554 aaKnown RBP3.17□□□□□ -1.9
LSM5-209ENST00000468872 SLC25A2Q9BXI2 301 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 BEX1Q9HBH7 125 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 CRLF2Q9HC73 371 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 CCNB1IP1Q9NPC3 277 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 ISYNA1Q9NPH2 558 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 TMEM9BQ9NQ34 198 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 PDP1Q9P0J1 537 aaPredicted RBP3.17□□□□□ -1.9
LSM5-209ENST00000468872 CLN8Q9UBY8 286 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 NBEAQ8NFP9 2946 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 CCDC88AQ3V6T2 1871 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 CELSR3Q9NYQ7 3312 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 TTC41PQ6P2S7 1318 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 SPTA1P02549 2419 aa3.17□□□□□ -1.9
LSM5-209ENST00000468872 IGHV5-51A0A0C4DH38 117 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 SNAI2O43623 268 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 GABARAPO95166 117 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 CD160O95971 181 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 PRB2P02812 416 aaPredicted RBP3.16□□□□□ -1.9
LSM5-209ENST00000468872 CT45A6P0DMU7 189 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 CT45A5P0DMU8 189 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 CT45A7P0DMV0 189 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 RAB3BP20337 219 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 F2RP25116 425 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 HMOX2P30519 316 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 KRTAP10-1P60331 282 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 HERVK_113P61574 105 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 IRF8Q02556 426 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 GINS1Q14691 196 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 DEFB116Q30KQ4 102 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 CAVIN4Q5BKX8 364 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 CT45A1Q5HYN5 189 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 CEMP1Q6PRD7 247 aaPredicted RBP3.16□□□□□ -1.9
LSM5-209ENST00000468872 ARL9Q6T311 187 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 FBXW12Q6X9E4 464 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 ZFP2Q6ZN57 461 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 KATNAL2Q8IYT4 538 aa3.16□□□□□ -1.9
LSM5-209ENST00000468872 TTC29Q8NA56 475 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms