RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 CX3CR1P49238 355 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 ZNF92Q03936 586 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 Q6ZR03 302 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 USP51Q70EK9 711 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 KRT77Q7Z794 578 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 ZNF679Q8IYX0 411 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 RHOXF1Q8NHV9 184 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 GTF3AQ92664 365 aaKnown RBP17.02■□□□□ 0.32
NPHP4-206ENST00000468253 MROQ9BYG7 248 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 SLC22A4Q9H015 551 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 RGCCQ9H4X1 137 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 TMEM100Q9NV29 134 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 IL19Q9UHD0 177 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 KLHDC2Q9Y2U9 406 aa17.02■□□□□ 0.32
NPHP4-206ENST00000468253 ZANQ9Y493 2812 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 SMAD7O15105 426 aaKnown RBP17.01■□□□□ 0.31
NPHP4-206ENST00000468253 OR2T7P0C7T2 308 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF121P58317 390 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-206ENST00000468253 ELF3P78545 371 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-206ENST00000468253 TRIP10Q15642 601 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 CARTPTQ16568 116 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 TSTQ16762 297 aaKnown RBP17.01■□□□□ 0.31
NPHP4-206ENST00000468253 MRPL21Q7Z2W9 205 aaKnown RBP17.01■□□□□ 0.31
NPHP4-206ENST00000468253 SLC35F2Q8IXU6 374 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 OR2T27Q8NH04 317 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 SGK3Q96BR1 496 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 ELMOD3Q96FG2 381 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 OR10A2Q9H208 303 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 SAP30LQ9HAJ7 183 aa17.01■□□□□ 0.31
NPHP4-206ENST00000468253 SMPD3Q9NY59 655 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-206ENST00000468253 IGHV1-69-2A0A0G2JMI3 117 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 CD300LBA8K4G0 201 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 LYNX1G3V0Z9 82 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 DLGAP1O14490 977 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 CASQ2O14958 399 aaPredicted RBP17■□□□□ 0.31
NPHP4-206ENST00000468253 TPD52L2O43399 206 aaKnown RBP17■□□□□ 0.31
NPHP4-206ENST00000468253 RP2O75695 350 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 ANXA2P07355 339 aaKnown RBP17■□□□□ 0.31
NPHP4-206ENST00000468253 MRPL3P09001 348 aaKnown RBP17■□□□□ 0.31
NPHP4-206ENST00000468253 TACSTD2P09758 323 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 LYNX1P0DP58 116 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 TNFAIP6P98066 277 aaPredicted RBP17■□□□□ 0.31
NPHP4-206ENST00000468253 EGR3Q06889 387 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 GLYATL3Q5SZD4 288 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 LRRN1Q6UXK5 716 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 SPRYD4Q8WW59 207 aaPredicted RBP17■□□□□ 0.31
NPHP4-206ENST00000468253 YIPF5Q969M3 257 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 Q96MT0 163 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 OR8B4Q96RC9 309 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF391Q9UJN7 358 aa17■□□□□ 0.31
NPHP4-206ENST00000468253 NOP16Q9Y3C1 178 aaKnown RBP17■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF670-ZNF695F2Z2N8 137 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 ENTPD6O75354 484 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 SLC2A1P11166 492 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 GABRB1P18505 474 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 TNFRSF1AP19438 455 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 MTNR1AP48039 350 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 HFEQ30201 348 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF322Q6U7Q0 402 aaPredicted RBP16.99■□□□□ 0.31
NPHP4-206ENST00000468253 FAM57BQ71RH2 274 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 KLBQ86Z14 1044 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 GALNT4Q8N4A0 578 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF555Q8NEP9 628 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 OR2Z1Q8NG97 314 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 OR51G2Q8NGK0 314 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 DNAJC27Q9NZQ0 273 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 MRPL15Q9P015 296 aaKnown RBP16.99■□□□□ 0.31
NPHP4-206ENST00000468253 COPS3Q9UNS2 423 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 LRP12Q9Y561 859 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 TLN2Q9Y4G6 2542 aa16.99■□□□□ 0.31
NPHP4-206ENST00000468253 C5orf63A6NC05 138 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 GGT3PA6NGU5 568 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 IFNL4K9M1U5 179 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 LY6G6DO95868 133 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 ATP6V1E1P36543 226 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 MMP16P51512 607 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 RIDAP52758 137 aaKnown RBP16.98■□□□□ 0.31
NPHP4-206ENST00000468253 PSMA6P60900 246 aaKnown RBP16.98■□□□□ 0.31
NPHP4-206ENST00000468253 SLC3A1Q07837 685 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 OGFRL1Q5TC84 451 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-206ENST00000468253 TTC23Q5W5X9 447 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 CLEC9AQ6UXN8 241 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 EGFL6Q8IUX8 553 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 OR5AS1Q8N127 324 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 CELF2-AS1Q8N7Q2 184 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 OR2AE1Q8NHA4 323 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 PGAM5Q96HS1 289 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 BPESC1Q9GZL8 116 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 GSX1Q9H4S2 264 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF275Q9NSD4 429 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF319Q9P2F9 582 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 PCDHGB1Q9Y5G3 927 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 N6AMT1Q9Y5N5 214 aa16.98■□□□□ 0.31
NPHP4-206ENST00000468253 TMEM269A0A1B0GVZ9 245 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 GMDSO60547 372 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 LILRA1O75019 489 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 SULT1C4O75897 302 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 GPR6P46095 362 aaPredicted RBP16.97■□□□□ 0.31
NPHP4-206ENST00000468253 SRP9P49458 86 aaKnown RBP16.97■□□□□ 0.31
NPHP4-206ENST00000468253 CXCR4P61073 352 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms