RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ATF6BQ99941 703 aa9.2□□□□□ -0.94
VPS26A-204ENST00000467852 ST6GALNAC5Q9BVH7 336 aa9.2□□□□□ -0.94
VPS26A-204ENST00000467852 SLC22A4Q9H015 551 aa9.2□□□□□ -0.94
VPS26A-204ENST00000467852 TMEM27Q9HBJ8 222 aa9.2□□□□□ -0.94
VPS26A-204ENST00000467852 SLC13A4Q9UKG4 626 aa9.2□□□□□ -0.94
VPS26A-204ENST00000467852 SIRT4Q9Y6E7 314 aaPredicted RBP9.2□□□□□ -0.94
VPS26A-204ENST00000467852 IGKV1D-43A0A0B4J1Z2 117 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 A0A0G2JPF8 293 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 TRIM64CA6NLI5 447 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 HNRNPCL2B2RXH8 293 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 HNRNPCL3B7ZW38 293 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 ACOT8O14734 319 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 FMO6PO60774 539 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 HNRNPCL1O60812 293 aaKnown RBP9.19□□□□□ -0.94
VPS26A-204ENST00000467852 RHBDL1O75783 438 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 PTBP3O95758 552 aaKnown RBP9.19□□□□□ -0.94
VPS26A-204ENST00000467852 CH25HO95992 272 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 BCHEP06276 602 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 GRPP07492 148 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 HNRNPCL4P0DMR1 293 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 GP9P14770 177 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 ETS2P15036 469 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 NDUFB7P17568 137 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 COX7A1P24310 79 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 DAP3P51398 398 aaKnown RBP9.19□□□□□ -0.94
VPS26A-204ENST00000467852 NCALDP61601 193 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 MRPS25P82663 173 aaKnown RBP9.19□□□□□ -0.94
VPS26A-204ENST00000467852 FMODQ06828 376 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 ENDOGQ14249 297 aaKnown RBP9.19□□□□□ -0.94
VPS26A-204ENST00000467852 C6orf136Q5SQH8 315 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 SLC25A47Q6Q0C1 308 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 TWIST2Q8WVJ9 160 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 RBP7Q96R05 134 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 CDRT15Q96T59 188 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 WDR76Q9H967 626 aa9.19□□□□□ -0.94
VPS26A-204ENST00000467852 SLC25A10Q9UBX3 287 aaPredicted RBP9.19□□□□□ -0.94
VPS26A-204ENST00000467852 TBL2Q9Y4P3 447 aaKnown RBP9.19□□□□□ -0.94
VPS26A-204ENST00000467852 TMEM238LA0A1B0GVL6 79 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 A0A1W2PPL8 197 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 TMEM247A6NEH6 219 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 BLOC1S5-TXNDC5H3BN57 136 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 GMDSO60547 372 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 IGHA1P01876 353 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 UMPSP11172 480 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 FSTP19883 344 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 MSR1P21757 451 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 BGNP21810 368 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 OR3A4PP47883 348 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 DNAJB13P59910 316 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 CASP8Q14790 479 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 SEC23BQ15437 767 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 ZNF74Q16587 644 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 RPS26P11Q5JNZ5 115 aaPredicted RBP9.18□□□□□ -0.94
VPS26A-204ENST00000467852 C9orf152Q5JTZ5 239 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 ZYG11AQ6WRX3 759 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 DHDDSQ86SQ9 333 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 OR4Q3Q8NH05 313 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 SPRYD4Q8WW59 207 aaPredicted RBP9.18□□□□□ -0.94
VPS26A-204ENST00000467852 C12orf43Q96C57 262 aaKnown RBP9.18□□□□□ -0.94
VPS26A-204ENST00000467852 ZNF180Q9UJW8 692 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 NDUFAF1Q9Y375 327 aa9.18□□□□□ -0.94
VPS26A-204ENST00000467852 A0A0B4J2E0 115 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 A0A1B0GX12 115 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 hCG_1809904A0A1W2PP81 198 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 A0A1W2PPE2 198 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 A0A1W2PR64 198 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 A0A1W2PRV1 198 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 CCDC154A6NI56 674 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 G3V2L1 256 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 SPNP16150 400 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 CA6P23280 308 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 OR12D2P58182 307 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 MZT1Q08AG7 82 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 OR1Q1Q15612 314 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 SRSF7Q16629 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
VPS26A-204ENST00000467852 PCK2Q16822 640 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 UGT3A2Q3SY77 523 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 LCNL1Q6ZST4 164 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 ZNF429Q86V71 674 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 FAM185AQ8N0U4 392 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 SLC38A5Q8WUX1 472 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 ST6GALNAC6Q969X2 333 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 NMD3Q96D46 503 aaKnown RBP9.17□□□□□ -0.94
VPS26A-204ENST00000467852 MED30Q96HR3 178 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 ADAT1Q9BUB4 502 aaKnown RBP9.17□□□□□ -0.94
VPS26A-204ENST00000467852 SLCO1B3Q9NPD5 702 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 ZNF229Q9UJW7 825 aa9.17□□□□□ -0.94
VPS26A-204ENST00000467852 A0A1W2PPH5 198 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 A8MZ25 164 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 KRT75O95678 551 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 ARG1P05089 322 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 PGA5P0DJD9 388 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 SELLP14151 372 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 TCP1P17987 556 aaKnown RBP9.16□□□□□ -0.94
VPS26A-204ENST00000467852 GRK5P34947 590 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 UGT2B15P54855 530 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 CDH12P55289 794 aa9.16□□□□□ -0.94
VPS26A-204ENST00000467852 MAD2L1Q13257 205 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms