RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 RAB40AQ8WXH6 277 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 LRGUKQ96M69 825 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 NUDT16L1Q9BRJ7 211 aaKnown RBP14.68□□□□□ -0.06
COL7A1-206ENST00000466591 TSSK6Q9BXA6 273 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 ESM1Q9NQ30 184 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 CD300AQ9UGN4 299 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 SAMHD1Q9Y3Z3 626 aaKnown RBP14.68□□□□□ -0.06
COL7A1-206ENST00000466591 LYVE1Q9Y5Y7 322 aa14.68□□□□□ -0.06
COL7A1-206ENST00000466591 IGHV2-70DA0A0C4DH43 119 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 RIIAD1A6NNX1 92 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 CD300LBA8K4G0 201 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 TBX1O43435 398 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 SPRY1O43609 319 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-206ENST00000466591 FAM20BO75063 409 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 ZNF3P17036 446 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 PRTN3P24158 256 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 SLC15A1P46059 708 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 PRKXP51817 358 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 FAM98BQ52LJ0 330 aaKnown RBP14.67□□□□□ -0.06
COL7A1-206ENST00000466591 DRAM2Q6UX65 266 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 COLCA1Q6ZS62 124 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 SPATC1Q76KD6 591 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 DOK3Q7L591 496 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 DHFR2Q86XF0 187 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 C19orf18Q8NEA5 215 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 OR2T33Q8NG76 320 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 OR8S1Q8NH09 359 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 OR2AE1Q8NHA4 323 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 DVL3Q92997 716 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-206ENST00000466591 MAP6Q96JE9 813 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 TRIM15Q9C019 465 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 TRIM36Q9NQ86 728 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 MRPL22Q9NWU5 206 aaKnown RBP14.67□□□□□ -0.06
COL7A1-206ENST00000466591 ACTR3BQ9P1U1 418 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 ERVK-18Q9QC07 812 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 RNF7Q9UBF6 113 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 BAIAP2Q9UQB8 552 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 U3KQV3 271 aa14.67□□□□□ -0.06
COL7A1-206ENST00000466591 ANKRD30BLA7E2S9 258 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 B2RBV5 119 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 GMDSO60547 372 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 SOX14O95416 240 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 ANXA2P07355 339 aaKnown RBP14.66□□□□□ -0.06
COL7A1-206ENST00000466591 GRPP07492 148 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 CD80P33681 288 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 CD200P41217 278 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 GATA4P43694 442 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 ENTPD1P49961 510 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 BLVRAP53004 296 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 GYS2P54840 703 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 TIGD6Q17RP2 521 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 SNAI3Q3KNW1 292 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 GPR157Q5UAW9 335 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 SFRP4Q6FHJ7 346 aaPredicted RBP14.66□□□□□ -0.06
COL7A1-206ENST00000466591 RASSF6Q6ZTQ3 369 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 BCL6BQ8N143 479 aaPredicted RBP14.66□□□□□ -0.06
COL7A1-206ENST00000466591 SPERTQ8NA61 448 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 SLC37A3Q8NCC5 494 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 TEX47Q8TBZ9 253 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 OPA3Q9H6K4 179 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 SP140LQ9H930 580 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 PNRC2Q9NPJ4 139 aaKnown RBP14.66□□□□□ -0.06
COL7A1-206ENST00000466591 C14orf119Q9NWQ9 140 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 COMMD3-BMI1R4GMX3 469 aa14.66□□□□□ -0.06
COL7A1-206ENST00000466591 ARHGAP32A7KAX9 2087 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 ZNF878C9JN71 531 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 C3orf80F5H4A9 247 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 H3BN98 237 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 ZNF593O00488 134 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-206ENST00000466591 BHLHE40O14503 412 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 PHYHO14832 338 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 ENSAO43768 121 aaKnown RBP14.65□□□□□ -0.06
COL7A1-206ENST00000466591 GASTP01350 101 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 GYPBP06028 91 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 IGHV4-38-2P0DP08 117 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 SLC2A1P11166 492 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 ATP6V1B2P21281 511 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 ZNF92Q03936 586 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 PAX8Q06710 450 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 PPP1R8Q12972 351 aaKnown RBP14.65□□□□□ -0.06
COL7A1-206ENST00000466591 MAB21L1Q13394 359 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 CRMP1Q14194 572 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 KRTAP27-1Q3LI81 207 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 KLF17Q5JT82 389 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-206ENST00000466591 GLYATL3Q5SZD4 288 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 CD276Q5ZPR3 534 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 SLAMF6Q96DU3 332 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 KCNJ15Q99712 375 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 BTBD10Q9BSF8 475 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 MUC13Q9H3R2 512 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 MAGIXQ9H6Y5 334 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 IL20Q9NYY1 176 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 MRPL15Q9P015 296 aaKnown RBP14.65□□□□□ -0.06
COL7A1-206ENST00000466591 PCDHGB1Q9Y5G3 927 aa14.65□□□□□ -0.06
COL7A1-206ENST00000466591 TRAV38-1A0A0B4J264 116 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 GNGT2O14610 69 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 ADAM20O43506 726 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 XRCC2O43543 280 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 HKR1P10072 659 aa14.64□□□□□ -0.07
COL7A1-206ENST00000466591 PAICSP22234 425 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms