RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 HRASLSQ9HDD0 168 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 ASF1BQ9NVP2 202 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 TUBD1Q9UJT1 453 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 NOSIPQ9Y314 301 aaKnown RBP16.38■□□□□ 0.21
CAPN3-209ENST00000466222 TMEM14AQ9Y6G1 99 aa16.38■□□□□ 0.21
CAPN3-209ENST00000466222 IGKV3D-15A0A087WSY6 115 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 ACOD1A6NK06 481 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 NOS1APO75052 506 aaPredicted RBP16.37■□□□□ 0.21
CAPN3-209ENST00000466222 PSMB1P20618 241 aaKnown RBP16.37■□□□□ 0.21
CAPN3-209ENST00000466222 GLO1Q04760 184 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 EGR3Q06889 387 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 METTL11BQ5VVY1 283 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 SLC25A47Q6Q0C1 308 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 RNF166Q96A37 237 aaPredicted RBP16.37■□□□□ 0.21
CAPN3-209ENST00000466222 HAVCR1Q96D42 359 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 MAP6Q96JE9 813 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 ALKBH3Q96Q83 286 aaPredicted RBP16.37■□□□□ 0.21
CAPN3-209ENST00000466222 AMELYQ99218 206 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 SEC61A2Q9H9S3 476 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 CLCF1Q9UBD9 225 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 SLC23A1Q9UHI7 598 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 DNAJC13O75165 2243 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 A0A1B0GUH1 482 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 A0A1W2PPL8 197 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 TMEM8BA6NDV4 472 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 KHDRBS3O75525 346 aaKnown RBP16.37■□□□□ 0.21
CAPN3-209ENST00000466222 PRSS45Q7RTY3 260 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 C20orf196Q8IYI0 205 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 RPRMLQ8N4K4 120 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 SLC26A10Q8NG04 563 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 OR8H1Q8NGG4 311 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 INTS14Q96SY0 518 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 SLC25A18Q9H1K4 315 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 LIN7BQ9HAP6 207 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 KCNG2Q9UJ96 466 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 FBXL3Q9UKT7 428 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 FOXJ3Q9UPW0 622 aa16.37■□□□□ 0.21
CAPN3-209ENST00000466222 TPRP12270 2363 aaKnown RBP16.36■□□□□ 0.21
CAPN3-209ENST00000466222 SSNA1O43805 119 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 ABHD16AO95870 558 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 TDGF1P3P51864 188 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 ART1P52961 327 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 ADAM8P78325 824 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 TSPO2Q5TGU0 170 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 STAC2Q6ZMT1 411 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 ZNF433Q8N7K0 673 aaPredicted RBP16.36■□□□□ 0.21
CAPN3-209ENST00000466222 C17orf50Q8WW18 174 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 C11orf40Q8WZ69 217 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 MED30Q96HR3 178 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 COMMD4Q9H0A8 199 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 RNF122Q9H9V4 155 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 BCO1Q9HAY6 547 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 CRLF2Q9HC73 371 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 MRM2Q9UI43 246 aaKnown RBP16.36■□□□□ 0.21
CAPN3-209ENST00000466222 RCE1Q9Y256 329 aa16.36■□□□□ 0.21
CAPN3-209ENST00000466222 MRPL33O75394 65 aaKnown RBP16.35■□□□□ 0.21
CAPN3-209ENST00000466222 WNT11O96014 354 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 OR3A3P47888 321 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 TMEM69Q5SWH9 247 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 LIPNQ5VXI9 398 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 CORO6Q6QEF8 472 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 TEX261Q6UWH6 196 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 HDDC2Q7Z4H3 204 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 LINC00346Q8IVM7 164 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 GLB1L2Q8IW92 636 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 MCEMP1Q8IX19 187 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 SYNPRQ8TBG9 265 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 MARVELD3Q96A59 401 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 DACT3Q96B18 629 aaPredicted RBP16.35■□□□□ 0.21
CAPN3-209ENST00000466222 RBM24Q9BX46 236 aaKnown RBP16.35■□□□□ 0.21
CAPN3-209ENST00000466222 ULBP2Q9BZM5 246 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 C12orf49Q9H741 205 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 DLL4Q9NR61 685 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 OR5V1Q9UGF6 321 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 U3KQ87 197 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 ANKRD20A5PA0PJZ0 165 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 TMEM212A6NML5 194 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 ZNF254O75437 659 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 SPARCP09486 303 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 OR8G3PP0DMU2 310 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 CXCL3P19876 107 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 DNASE1P24855 282 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 CFPP27918 469 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 PTH2RP49190 550 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 RNPS1Q15287 305 aaKnown RBP16.35■□□□□ 0.21
CAPN3-209ENST00000466222 ACSF3Q4G176 576 aaPredicted RBP16.35■□□□□ 0.21
CAPN3-209ENST00000466222 DNM1P34Q6PK57 102 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 PCSK4Q6UW60 755 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 P4HA3Q7Z4N8 544 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 IZUMO1Q8IYV9 350 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 C9orf106Q8NAJ2 232 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 OR52I2Q8NH67 350 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 SLC7A10Q9NS82 523 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 LAMP5Q9UJQ1 280 aa16.35■□□□□ 0.21
CAPN3-209ENST00000466222 LINC00862A6NCI5 91 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 OR14I1A6ND48 311 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 LAP3P28838 519 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 FOXG1P55316 489 aaPredicted RBP16.34■□□□□ 0.21
CAPN3-209ENST00000466222 P2RX3P56373 397 aa16.34■□□□□ 0.21
CAPN3-209ENST00000466222 ESCO2Q56NI9 601 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms