RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 METRNQ9UJH8 293 aa18.3■□□□□ 0.52
LIME1-203ENST00000465591 A0A0G2JMP0 313 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 A0A0X1KG70 313 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 F5H0A9 414 aaPredicted RBP18.29■□□□□ 0.52
LIME1-203ENST00000465591 ADRA2CP18825 462 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 SRP9P49458 86 aaKnown RBP18.29■□□□□ 0.52
LIME1-203ENST00000465591 FAM201AQ5SY85 155 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 DCAF12L2Q5VW00 463 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 DRAM2Q6UX65 266 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 MRPL21Q7Z2W9 205 aaKnown RBP18.29■□□□□ 0.52
LIME1-203ENST00000465591 OR4M2Q8NGB6 313 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 OTULINQ96BN8 352 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 AMELYQ99218 206 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 KCNJ15Q99712 375 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 REPIN1Q9BWE0 567 aaKnown RBP18.29■□□□□ 0.52
LIME1-203ENST00000465591 MMADHCQ9H3L0 296 aaPredicted RBP18.29■□□□□ 0.52
LIME1-203ENST00000465591 NTN4Q9HB63 628 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 MMP26Q9NRE1 261 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 OPN4Q9UHM6 478 aa18.29■□□□□ 0.52
LIME1-203ENST00000465591 CD300LBA8K4G0 201 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 TCF21O43680 179 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 E2F6O75461 281 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 HOXA4Q00056 320 aaPredicted RBP18.28■□□□□ 0.52
LIME1-203ENST00000465591 SHQ1Q6PI26 577 aaKnown RBP18.28■□□□□ 0.52
LIME1-203ENST00000465591 DPY19L4Q7Z388 723 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 ERI1Q8IV48 349 aaKnown RBP18.28■□□□□ 0.52
LIME1-203ENST00000465591 SPICQ8N5J4 248 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 OR6N2Q8NGY6 317 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 OR51V1Q9H2C8 321 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 MARCH7Q9H992 704 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 DNAJB9Q9UBS3 223 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 PCDHB10Q9UN67 800 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 N6AMT1Q9Y5N5 214 aa18.28■□□□□ 0.52
LIME1-203ENST00000465591 CEACAM18A8MTB9 384 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 ZNF878C9JN71 531 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 TRAPPC2LH3BP13 241 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 GLCEO94923 617 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 OSMP13725 252 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 CA6P23280 308 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 GSTT1P30711 240 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 MDH2P40926 338 aaKnown RBP18.27■□□□□ 0.52
LIME1-203ENST00000465591 RAD23AP54725 363 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 EIF2B1Q14232 305 aaKnown RBP18.27■□□□□ 0.52
LIME1-203ENST00000465591 PRAMEF6Q5VXH4 476 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 PLBD1Q6P4A8 553 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 TIGD4Q8IY51 512 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 KLHL36Q8N4N3 616 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 SPRYD4Q8WW59 207 aaPredicted RBP18.27■□□□□ 0.52
LIME1-203ENST00000465591 DVL3Q92997 716 aaPredicted RBP18.27■□□□□ 0.52
LIME1-203ENST00000465591 ZMYND19Q96E35 227 aaPredicted RBP18.27■□□□□ 0.52
LIME1-203ENST00000465591 INTS14Q96SY0 518 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 ABHD6Q9BV23 337 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 OCEL1Q9H607 264 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 TMEM165Q9HC07 324 aa18.27■□□□□ 0.52
LIME1-203ENST00000465591 FOXH1O75593 365 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 TIPRLO75663 272 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 RGS9O75916 674 aaPredicted RBP18.26■□□□□ 0.51
LIME1-203ENST00000465591 VENTXO95231 258 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 HOXB6P17509 224 aaKnown RBP18.26■□□□□ 0.51
LIME1-203ENST00000465591 CD200P41217 278 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 GATA4P43694 442 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 BLVRAP53004 296 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 CDK5Q00535 292 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 TAF13Q15543 124 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 MPPED2Q15777 294 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 TMEM236Q5W0B7 351 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 C1QL2Q7Z5L3 287 aa18.26■□□□□ 0.51
LIME1-203ENST00000465591 J3QLI3 93 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 IFNL4K9M1U5 179 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 SELENOFO60613 162 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 ZNF181Q2M3W8 571 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 LIPNQ5VXI9 398 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 PRSS45Q7RTY3 260 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 DEFB108BQ8NET1 73 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 BBS1Q8NFJ9 593 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 RNF133Q8WVZ7 376 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 UTP4Q969X6 686 aaKnown RBP18.25■□□□□ 0.51
LIME1-203ENST00000465591 C7orf69Q9H7B7 122 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 UFSP2Q9NUQ7 469 aa18.25■□□□□ 0.51
LIME1-203ENST00000465591 POLR3KQ9Y2Y1 108 aaPredicted RBP18.25■□□□□ 0.51
LIME1-203ENST00000465591 GGT3PA6NGU5 568 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 A8MXK9 166 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 PRR23D1E9PI22 279 aaPredicted RBP18.24■□□□□ 0.51
LIME1-203ENST00000465591 FAM20BO75063 409 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 FSHBP01225 129 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 WNT2P09544 360 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 PRR23D2P0DMB1 279 aaPredicted RBP18.24■□□□□ 0.51
LIME1-203ENST00000465591 ANXA8P13928 327 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 EPHA1P21709 976 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 CX3CR1P49238 355 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 GABPB1Q06547 395 aaPredicted RBP18.24■□□□□ 0.51
LIME1-203ENST00000465591 OR8G1Q15617 311 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 CPOQ8IVL8 374 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 CELF2-AS1Q8N7Q2 184 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 C19orf18Q8NEA5 215 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 SEMA6DQ8NFY4 1073 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 OR56B2PQ8NGI1 322 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 TMEM246Q9BRR3 403 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 ADAT1Q9BUB4 502 aaKnown RBP18.24■□□□□ 0.51
LIME1-203ENST00000465591 YY1AP1Q9H869 796 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms