RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 HCAR1Q9BXC0 346 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 FN3KRPQ9HA64 309 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 SRA1Q9HD15 236 aaKnown RBP8.07□□□□□ -1.12
USP39-212ENST00000465514 NOX4Q9NPH5 578 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 CLN8Q9UBY8 286 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 RPS6KA6Q9UK32 745 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 B9D1Q9UPM9 204 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 AURKCQ9UQB9 309 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 FAM32AQ9Y421 112 aaKnown RBP8.07□□□□□ -1.12
USP39-212ENST00000465514 POMT1Q9Y6A1 747 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 IGLV1-36A0A0B4J1U3 117 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 TRBV4-1A0A0J9YWV2 114 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 F5H5K5 113 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 K7EIL1 84 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 SASH3O75995 380 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 PPP1R3DO95685 299 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 IRF2P14316 349 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 RHCEP18577 417 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 CRABP1P29762 137 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 GATA4P43694 442 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 FGF12P61328 243 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 COX10Q12887 443 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 MAB21L1Q13394 359 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 DOC2BQ14184 412 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 GK2Q14410 553 aaPredicted RBP8.06□□□□□ -1.12
USP39-212ENST00000465514 KRTAP27-1Q3LI81 207 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 WDR25Q64LD2 544 aaPredicted RBP8.06□□□□□ -1.12
USP39-212ENST00000465514 C8orf82Q6P1X6 216 aaPredicted RBP8.06□□□□□ -1.12
USP39-212ENST00000465514 PGM2L1Q6PCE3 622 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 DNM1P34Q6PK57 102 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 SMARCD3Q6STE5 483 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 ZNF841Q6ZN19 808 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 CFAP77Q6ZQR2 320 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 DCDC5Q6ZRR9 648 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 COLCA1Q6ZS62 124 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 NAA40Q86UY6 237 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 LINC00346Q8IVM7 164 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 OR6V1Q8N148 313 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 FITM2Q8N6M3 262 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 C19orf18Q8NEA5 215 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 OR11L1Q8NGX0 322 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 SSMEM1Q8WWF3 244 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 ERMAPQ96PL5 475 aaPredicted RBP8.06□□□□□ -1.12
USP39-212ENST00000465514 KCTD14Q9BQ13 255 aaPredicted RBP8.06□□□□□ -1.12
USP39-212ENST00000465514 CDADC1Q9BWV3 514 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 ARGLU1Q9NWB6 273 aaPredicted RBP8.06□□□□□ -1.12
USP39-212ENST00000465514 NDUFAF4Q9P032 175 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 DNAH1Q9P2D7 4330 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 HYDINQ4G0P3 5121 aa8.06□□□□□ -1.12
USP39-212ENST00000465514 PHYHO14832 338 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 FAM20BO75063 409 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 DIRAS1O95057 198 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 LCATP04180 440 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 ACSM4P0C7M7 580 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 H2AFXP16104 143 aaPredicted RBP8.05□□□□□ -1.12
USP39-212ENST00000465514 MDH1P40925 334 aaKnown RBP8.05□□□□□ -1.12
USP39-212ENST00000465514 CD200P41217 278 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 HOXA4Q00056 320 aaPredicted RBP8.05□□□□□ -1.12
USP39-212ENST00000465514 EGR3Q06889 387 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 ECH1Q13011 328 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 MPPED2Q15777 294 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 CLEC12AQ5QGZ9 265 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 GPR157Q5UAW9 335 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 PRAMEF6Q5VXH4 476 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 FOXB2Q5VYV0 432 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 SLC18B1Q6NT16 456 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 Q6ZSV7 163 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 CELF2-AS1Q8N7Q2 184 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 SLC26A10Q8NG04 563 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 OR2AJ1Q8NGZ0 328 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 OR52J3Q8NH60 311 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 Q8TCH9 128 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 ERGIC1Q969X5 290 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 SLCO4A1Q96BD0 722 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 C7orf34Q96L11 122 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 NMNAT3Q96T66 252 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 PITX2Q99697 317 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 FUZQ9BT04 418 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 TOR3AQ9H497 397 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 EFCAB1Q9HAE3 211 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 KRCC1Q9NPI7 259 aaPredicted RBP8.05□□□□□ -1.12
USP39-212ENST00000465514 UFSP2Q9NUQ7 469 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 TMCC3Q9ULS5 477 aa8.05□□□□□ -1.12
USP39-212ENST00000465514 CSMD3Q7Z407 3707 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 C22orf46C9J442 243 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 NDUFAB1O14561 156 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 ENSAO43768 121 aaKnown RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 RENP00797 406 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 SFTPBP07988 381 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 HIST1H1CP16403 213 aaKnown RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 CA6P23280 308 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 PSMB10P40306 273 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 RAD23AP54725 363 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 BPIFB3P59826 476 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 CD69Q07108 199 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 TRAP1Q12931 704 aaKnown RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 MALLQ13021 153 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 KRT72Q14CN4 511 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 OR8G1Q15617 311 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 RFX4Q33E94 735 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms