RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CHST10O43529 356 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 GLAP06280 429 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 POLR2MP0CAP2 368 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 PGA4P0DJD7 388 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 PGA3P0DJD8 388 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 PGA5P0DJD9 388 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 HTR1DP28221 377 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 CXCL12P48061 93 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 GFERP55789 205 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 RAB11AP62491 216 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 CRADDP78560 199 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 CDK5Q00535 292 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 ZNF33AQ06730 810 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 TFDP2Q14188 446 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 RAB11BQ15907 218 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 KLHL40Q2TBA0 621 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 SAXO2Q658L1 398 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 TTC19Q6DKK2 380 aaPredicted RBP2.4□□□□□ -2.03
CLK1-208ENST00000464454 SHISA6Q6ZSJ9 500 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 UNC93AQ86WB7 457 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 ZNF547Q8IVP9 402 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 LRRC75AQ8NAA5 344 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 FAM184AQ8NB25 1140 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 UBAC2Q8NBM4 344 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 OR6N1Q8NGY5 312 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 ZNF461Q8TAF7 563 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 ISG20Q96AZ6 181 aaKnown RBP2.4□□□□□ -2.03
CLK1-208ENST00000464454 APH1AQ96BI3 265 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 CSPG4P5Q96PW8 444 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 FGF23Q9GZV9 251 aaPredicted RBP2.4□□□□□ -2.03
CLK1-208ENST00000464454 C8orf33Q9H7E9 229 aaPredicted RBP2.4□□□□□ -2.03
CLK1-208ENST00000464454 SLC38A10Q9HBR0 1119 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 CRLF2Q9HC73 371 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 CD209Q9NNX6 404 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 SIRT7Q9NRC8 400 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 MCUBQ9NWR8 336 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 PEF1Q9UBV8 284 aaKnown RBP2.4□□□□□ -2.03
CLK1-208ENST00000464454 DDX19BQ9UMR2 479 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 TNS2Q63HR2 1409 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 PCDH11XQ9BZA7 1347 aa2.4□□□□□ -2.03
CLK1-208ENST00000464454 SMIM26A0A096LP01 95 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 GOLGA6L7A0A1B0GV03 622 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 C7orf66A4D0T2 115 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 ANKRD65E5RJM6 399 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 H0YJW9 148 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 ZBTB5O15062 677 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 NMT2O60551 498 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 HSBP1O75506 76 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 TDP2O95551 362 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 CD37P11049 281 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 TCP1P17987 556 aaKnown RBP2.39□□□□□ -2.03
CLK1-208ENST00000464454 CD82P27701 267 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 KIR3DL2P43630 455 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 SLC11A1P49279 550 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 AP1S2P56377 157 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 TAS2R46P59540 309 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 DOC2AQ14183 400 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 SHHQ15465 462 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 RPEL1Q2QD12 228 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 COX19Q49B96 90 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 AP1ARQ63HQ0 302 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 H3F3CQ6NXT2 135 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 ZFP1Q6P2D0 407 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 FAM122BQ7Z309 247 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 CMTM8Q8IZV2 173 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 ARRDC1Q8N5I2 433 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 NECAP1Q8NC96 275 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 GPR26Q8NDV2 337 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 OR10W1Q8NGF6 305 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 LINC01560Q8TB33 94 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 L3HYPDHQ96EM0 354 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 SGTBQ96EQ0 304 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 OR10C1Q96KK4 312 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 LINC00477Q96M19 166 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 NAP1L5Q96NT1 182 aaPredicted RBP2.39□□□□□ -2.03
CLK1-208ENST00000464454 DOK1Q99704 481 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 UQCC2Q9BRT2 126 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 RSG1Q9BU20 258 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 SAMD10Q9BYL1 202 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 DEFB129Q9H1M3 183 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 BLZF1Q9H2G9 400 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 C1orf198Q9H425 327 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 RGS18Q9NS28 235 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 ENOPH1Q9UHY7 261 aa2.39□□□□□ -2.03
CLK1-208ENST00000464454 AHDC1Q5TGY3 1603 aaPredicted RBP2.39□□□□□ -2.03
CLK1-208ENST00000464454 GABRR3A8MPY1 467 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 KRBOX1C9JBD0 128 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 TNFRSF11BO00300 401 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 TAAR5O14804 337 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 CHMP2AO43633 222 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 EIF1BO60739 113 aaKnown RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 CCNKO75909 580 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 FARS2O95363 451 aaKnown RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 CCNE2O96020 404 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 OXTP01178 125 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 TACSTD2P09758 323 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 IL1RNP18510 177 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 MSR1P21757 451 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms