RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MSL2Q9HCI7 577 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 TUBG2Q9NRH3 451 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 LAMP5Q9UJQ1 280 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 EXOGQ9Y2C4 368 aaKnown RBP14.52□□□□□ -0.09
VPS52-215ENST00000464425 ZSCAN5BA6NJL1 495 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 VWC2LB2RUY7 222 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 ZNF878C9JN71 531 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 J3QRE1 110 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 PHYHO14832 338 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 TPD52L2O43399 206 aaKnown RBP14.51□□□□□ -0.09
VPS52-215ENST00000464425 CDC14BO60729 498 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 IGHV1-46P01743 117 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 LCATP04180 440 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 HEXAP06865 529 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 MRPL3P09001 348 aaKnown RBP14.51□□□□□ -0.09
VPS52-215ENST00000464425 DBTP11182 482 aaKnown RBP14.51□□□□□ -0.09
VPS52-215ENST00000464425 USF1P22415 310 aaPredicted RBP14.51□□□□□ -0.09
VPS52-215ENST00000464425 SLC15A1P46059 708 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 HCCSP53701 268 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 TPTEP56180 551 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 CSNK2BP67870 215 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 ZNF91Q05481 1191 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 RAB40BQ12829 278 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 SMN1Q16637 294 aaKnown RBP14.51□□□□□ -0.09
VPS52-215ENST00000464425 PCGF3Q3KNV8 242 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 KLHL22Q53GT1 634 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 KCTD18Q6PI47 426 aaPredicted RBP14.51□□□□□ -0.09
VPS52-215ENST00000464425 DEGS2Q6QHC5 323 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 THEM6Q8WUY1 208 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 RDH5Q92781 318 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 SPTSSAQ969W0 71 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 HAVCR1Q96D42 359 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 COG8Q96MW5 612 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 COPS4Q9BT78 406 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 DECR2Q9NUI1 292 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 PLCXD1Q9NUJ7 323 aa14.51□□□□□ -0.09
VPS52-215ENST00000464425 PURGQ9UJV8 347 aaKnown RBP14.51□□□□□ -0.09
VPS52-215ENST00000464425 CR1P17927 2039 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 CHD3Q12873 2000 aaKnown RBP14.5□□□□□ -0.09
VPS52-215ENST00000464425 M0R135 149 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 OTX1P32242 354 aaPredicted RBP14.5□□□□□ -0.09
VPS52-215ENST00000464425 SLC6A9P48067 706 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 PRSS12P56730 875 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 CXCR4P61073 352 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 GRB2P62993 217 aaKnown RBP14.5□□□□□ -0.09
VPS52-215ENST00000464425 ROM1Q03395 351 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 LOXL1Q08397 574 aaPredicted RBP14.5□□□□□ -0.09
VPS52-215ENST00000464425 LAIR2Q6ISS4 152 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 OR5AS1Q8N127 324 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 YIPF5Q969M3 257 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 LGALS12Q96DT0 336 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 ZNF799Q96GE5 643 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 C1QTNF5Q9BXJ0 243 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 Q9H521 79 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 AMBNQ9NP70 447 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 CYSLTR2Q9NS75 346 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 KLHDC2Q9Y2U9 406 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 N6AMT1Q9Y5N5 214 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 ABCA1O95477 2261 aa14.5□□□□□ -0.09
VPS52-215ENST00000464425 SETD2Q9BYW2 2564 aaPredicted RBP14.49□□□□□ -0.09
VPS52-215ENST00000464425 IGHV4-61A0A0C4DH41 118 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 IRGMA1A4Y4 181 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 ZNF670-ZNF695F2Z2N8 137 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 J3QW42 95 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 DENRO43583 198 aaKnown RBP14.49□□□□□ -0.09
VPS52-215ENST00000464425 ZNF254O75437 659 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 FADS2O95864 444 aaKnown RBP14.49□□□□□ -0.09
VPS52-215ENST00000464425 RAC2P15153 192 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 KITLGP21583 273 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 GIFP27352 417 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 LIPAP38571 399 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 OPRL1P41146 370 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 PRKXP51817 358 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 ACTC1P68032 377 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 ACTA1P68133 377 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 EGR3Q06889 387 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 KRTAP1-1Q07627 177 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 OR2T2Q6IF00 324 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 COLCA1Q6ZS62 124 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 ZNF540Q8NDQ6 660 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 AMELYQ99218 206 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 KCNJ15Q99712 375 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 NKIRAS2Q9NYR9 191 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 COPS3Q9UNS2 423 aa14.49□□□□□ -0.09
VPS52-215ENST00000464425 A0A1W2PQL4 384 aaPredicted RBP14.48□□□□□ -0.09
VPS52-215ENST00000464425 C5orf63A6NC05 138 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 APOC1P02654 83 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 SLC2A1P11166 492 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 RIN1Q13671 783 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 TMEM249Q2WGJ8 235 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 SNAI3Q3KNW1 292 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 C6orf141Q5SZD1 244 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 FBXW12Q6X9E4 464 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.48□□□□□ -0.09
VPS52-215ENST00000464425 EGFL6Q8IUX8 553 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 ZNF679Q8IYX0 411 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 ACBD7Q8N6N7 88 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 OR10H4Q8NGA5 316 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 OR8B4Q96RC9 309 aa14.48□□□□□ -0.09
VPS52-215ENST00000464425 MYCBPQ99417 103 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms